Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 9:14790785-15260478

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56 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Mre11a 9 14784654 to 14837123 52469 + protein coding gene MRE11A homolog A, double strand break repair nuclease
Gm47154 9 14807774 to 14808040 266 - pseudogene predicted gene, 47154
Tssr83848 9 14810665 to 14810670 5 + TSS region transcription start site region 83848
Gm16379 9 14845365 to 14845712 347 - pseudogene predicted pseudogene 16379
Gm16302 9 14845613 to 14847835 2222 + lincRNA gene predicted gene 16302
Tssr83849 9 14858470 to 14858478 8 + TSS region transcription start site region 83849
Cpgi21364 9 14859802 to 14860865 1063 CpG island CpG island 21364
Tssr88207 9 14860077 to 14860105 28 - TSS region transcription start site region 88207
Gpr83 9 14860210 to 14870789 10579 + protein coding gene G protein-coupled receptor 83
Tssr83850 9 14860232 to 14860246 14 + TSS region transcription start site region 83850
Izumo1r 9 14885814 to 14903949 18135 - protein coding gene IZUMO1 receptor, JUNO
Tssr83851 9 14900520 to 14900545 25 + TSS region transcription start site region 83851
Tssr88208 9 14900795 to 14900843 48 - TSS region transcription start site region 88208
Tssr88209 9 14901902 to 14901911 9 - TSS region transcription start site region 88209
Tssr88210 9 14902524 to 14902559 35 - TSS region transcription start site region 88210
Tssr88211 9 14902560 to 14902571 11 - TSS region transcription start site region 88211
Tssr83852 9 14902672 to 14902692 20 + TSS region transcription start site region 83852
Tssr88212 9 14903052 to 14903067 15 - TSS region transcription start site region 88212
Tssr83853 9 14903195 to 14903204 9 + TSS region transcription start site region 83853
Tssr83854 9 14903494 to 14903501 7 + TSS region transcription start site region 83854
Tssr83855 9 14903507 to 14903520 13 + TSS region transcription start site region 83855
Tssr88213 9 14903752 to 14903772 20 - TSS region transcription start site region 88213
Tssr2785 9 14903783 to 14903786 3 - TSS region transcription start site region 2785
Tssr88214 9 14903808 to 14903815 7 - TSS region transcription start site region 88214
Tssr88215 9 14903851 to 14903854 3 - TSS region transcription start site region 88215
Tssr88216 9 14903866 to 14903882 16 - TSS region transcription start site region 88216
Tssr88217 9 14903890 to 14903897 7 - TSS region transcription start site region 88217
Tssr88218 9 14903910 to 14903921 11 - TSS region transcription start site region 88218
Tssr88219 9 14903938 to 14903948 10 - TSS region transcription start site region 88219
Tssr88220 9 14903962 to 14903971 9 - TSS region transcription start site region 88220
Tssr88221 9 14903990 to 14904000 10 - TSS region transcription start site region 88221
Tssr88222 9 14904723 to 14904734 11 - TSS region transcription start site region 88222
Gm18789 9 14915472 to 14916021 549 - pseudogene predicted gene, 18789
Gm47214 9 14949463 to 14977583 28120 + lincRNA gene predicted gene, 47214
n-TKctt4 9 14958433 to 14958505 72 - tRNA gene nuclear encoded tRNA lysine 4 (anticodon CTT)
Panx1 9 15005785 to 15045478 39693 - protein coding gene pannexin 1
Tssr88223 9 15007836 to 15007871 35 - TSS region transcription start site region 88223
Tssr88224 9 15007894 to 15007901 7 - TSS region transcription start site region 88224
Cpgi21365 9 15044576 to 15045766 1190 CpG island CpG island 21365
Tssr88225 9 15045106 to 15045135 29 - TSS region transcription start site region 88225
Tssr88226 9 15045145 to 15045156 11 - TSS region transcription start site region 88226
Tssr88227 9 15045378 to 15045502 124 - TSS region transcription start site region 88227
Tssr83856 9 15045581 to 15045593 12 + TSS region transcription start site region 83856
Hephl1 9 15051841 to 15112108 60267 - protein coding gene hephaestin-like 1
Tssr88228 9 15112100 to 15112119 19 - TSS region transcription start site region 88228
Tssr88229 9 15112145 to 15112157 12 - TSS region transcription start site region 88229
D9Mit220 9 15147858 to 15147976 118 DNA segment DNA segment, Chr 9, Massachusetts Institute of Technology 220
Tssr83857 9 15207108 to 15207109 1 + TSS region transcription start site region 83857
Tssr83858 9 15208434 to 15208440 6 + TSS region transcription start site region 83858
Gm22658 9 15211631 to 15211785 154 - snRNA gene predicted gene, 22658
D9Dcr137 9 15215513 to 15215608 95 DNA segment DNA Segment, Chr 9, Derry C. Roopenian 137
Gm39293 9 15226918 to 15233358 6440 - lncRNA gene predicted gene, 39293
Cpgi21366 9 15238516 to 15239615 1099 CpG island CpG island 21366
Vstm5 9 15239045 to 15259416 20371 + protein coding gene V-set and transmembrane domain containing 5
Tssr83859 9 15239066 to 15239155 89 + TSS region transcription start site region 83859
Med17 9 15260351 to 15279931 19580 - protein coding gene mediator complex subunit 17