Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 9:14634506-14774515

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47 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Amotl1 9 14541966 to 14645056 103090 - protein coding gene angiomotin-like 1
Tssr88175 9 14643523 to 14643542 19 - TSS region transcription start site region 88175
Tssr88176 9 14643555 to 14643571 16 - TSS region transcription start site region 88176
Tssr2784 9 14643609 to 14643616 7 + TSS region transcription start site region 2784
Tssr83841 9 14643647 to 14643657 10 + TSS region transcription start site region 83841
Gm34263 9 14643772 to 14645792 2020 + lincRNA gene predicted gene, 34263
Tssr88177 9 14662906 to 14662920 14 - TSS region transcription start site region 88177
Tssr88178 9 14662925 to 14662950 25 - TSS region transcription start site region 88178
Tssr88179 9 14662961 to 14662974 13 - TSS region transcription start site region 88179
Tssr88180 9 14662988 to 14663006 18 - TSS region transcription start site region 88180
Tssr88181 9 14663014 to 14663076 62 - TSS region transcription start site region 88181
Gm7607 9 14663022 to 14665099 2077 + lincRNA gene predicted gene 7607
Tssr83842 9 14663070 to 14663078 8 + TSS region transcription start site region 83842
Tssr88182 9 14663098 to 14663117 19 - TSS region transcription start site region 88182
Tssr88183 9 14675989 to 14675995 6 - TSS region transcription start site region 88183
Tssr88184 9 14676017 to 14676028 11 - TSS region transcription start site region 88184
Tssr88185 9 14676036 to 14676041 5 - TSS region transcription start site region 88185
Tssr88186 9 14676048 to 14676054 6 - TSS region transcription start site region 88186
Tssr88187 9 14676224 to 14676251 27 - TSS region transcription start site region 88187
Gm19790 9 14679970 to 14680220 250 + pseudogene predicted gene, 19790
Gm18997 9 14693523 to 14694338 815 + pseudogene predicted gene, 18997
Piwil4 9 14701782 to 14740765 38983 - protein coding gene piwi-like RNA-mediated gene silencing 4
Tssr83843 9 14704506 to 14704515 9 + TSS region transcription start site region 83843
Tssr83844 9 14704525 to 14704551 26 + TSS region transcription start site region 83844
Gm10706 9 14704642 to 14719058 14416 + antisense lncRNA gene predicted gene 10706
Tssr88188 9 14718381 to 14718393 12 - TSS region transcription start site region 88188
Gm34651 9 14724626 to 14732081 7455 + lncRNA gene predicted gene, 34651
Gm15586 9 14736195 to 14736722 527 + pseudogene predicted gene 15586
Cpgi21360 9 14740516 to 14740760 244 CpG island CpG island 21360
Tssr88189 9 14740618 to 14740624 6 - TSS region transcription start site region 88189
Tssr88190 9 14740642 to 14740653 11 - TSS region transcription start site region 88190
Tssr88191 9 14740666 to 14740677 11 - TSS region transcription start site region 88191
Tssr88192 9 14740691 to 14740696 5 - TSS region transcription start site region 88192
Fut4 9 14748459 to 14752122 3663 - protein coding gene fucosyltransferase 4
Cpgi21361 9 14750660 to 14752525 1865 CpG island CpG island 21361
Tssr88193 9 14751958 to 14751973 15 - TSS region transcription start site region 88193
Tssr88194 9 14751987 to 14752016 29 - TSS region transcription start site region 88194
1700012B09Rik 9 14756592 to 14771034 14442 - protein coding gene RIKEN cDNA 1700012B09 gene
Cpgi21362 9 14770832 to 14771069 237 CpG island CpG island 21362
Tssr88195 9 14770964 to 14770976 12 - TSS region transcription start site region 88195
Tssr88196 9 14770979 to 14771000 21 - TSS region transcription start site region 88196
Tssr88197 9 14771004 to 14771044 40 - TSS region transcription start site region 88197
Tssr88198 9 14771141 to 14771150 9 - TSS region transcription start site region 88198
Tssr88199 9 14771156 to 14771165 9 - TSS region transcription start site region 88199
Tssr88200 9 14771171 to 14771178 7 - TSS region transcription start site region 88200
Tssr88201 9 14771189 to 14771202 13 - TSS region transcription start site region 88201
Tssr88202 9 14771205 to 14771221 16 - TSS region transcription start site region 88202