Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 9:14553772-14735792

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46 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Amotl1 9 14541966 to 14645056 103090 - protein coding gene angiomotin-like 1
Tssr88160 9 14574603 to 14574606 3 - TSS region transcription start site region 88160
5830461L22Rik 9 14586095 to 14592609 6514 unclassified gene RIKEN cDNA 5830461L22 gene
Tssr88161 9 14596519 to 14596535 16 - TSS region transcription start site region 88161
Cpgi21359 9 14614230 to 14615155 925 CpG island CpG island 21359
Tssr88162 9 14614799 to 14614808 9 - TSS region transcription start site region 88162
Tssr88163 9 14614826 to 14614837 11 - TSS region transcription start site region 88163
Tssr2783 9 14614865 to 14614884 19 - TSS region transcription start site region 2783
Tssr88164 9 14614893 to 14614906 13 - TSS region transcription start site region 88164
Tssr88165 9 14614949 to 14615034 85 - TSS region transcription start site region 88165
Tssr88166 9 14615297 to 14615309 12 - TSS region transcription start site region 88166
Tssr88167 9 14615389 to 14615401 12 - TSS region transcription start site region 88167
Tssr88168 9 14615418 to 14615425 7 - TSS region transcription start site region 88168
Tssr88169 9 14615428 to 14615438 10 - TSS region transcription start site region 88169
Tssr88170 9 14615445 to 14615455 10 - TSS region transcription start site region 88170
Tssr88171 9 14615473 to 14615490 17 - TSS region transcription start site region 88171
4930584E12Rik 9 14618585 to 14619565 980 - unclassified gene RIKEN cDNA 4930584E12 gene
Tssr88172 9 14634235 to 14634240 5 - TSS region transcription start site region 88172
Tssr88173 9 14634272 to 14634277 5 - TSS region transcription start site region 88173
Tssr88174 9 14634291 to 14634324 33 - TSS region transcription start site region 88174
Tssr88175 9 14643523 to 14643542 19 - TSS region transcription start site region 88175
Tssr88176 9 14643555 to 14643571 16 - TSS region transcription start site region 88176
Tssr2784 9 14643609 to 14643616 7 + TSS region transcription start site region 2784
Tssr83841 9 14643647 to 14643657 10 + TSS region transcription start site region 83841
Gm34263 9 14643772 to 14645792 2020 + lincRNA gene predicted gene, 34263
Tssr88177 9 14662906 to 14662920 14 - TSS region transcription start site region 88177
Tssr88178 9 14662925 to 14662950 25 - TSS region transcription start site region 88178
Tssr88179 9 14662961 to 14662974 13 - TSS region transcription start site region 88179
Tssr88180 9 14662988 to 14663006 18 - TSS region transcription start site region 88180
Tssr88181 9 14663014 to 14663076 62 - TSS region transcription start site region 88181
Gm7607 9 14663022 to 14665099 2077 + lincRNA gene predicted gene 7607
Tssr83842 9 14663070 to 14663078 8 + TSS region transcription start site region 83842
Tssr88182 9 14663098 to 14663117 19 - TSS region transcription start site region 88182
Tssr88183 9 14675989 to 14675995 6 - TSS region transcription start site region 88183
Tssr88184 9 14676017 to 14676028 11 - TSS region transcription start site region 88184
Tssr88185 9 14676036 to 14676041 5 - TSS region transcription start site region 88185
Tssr88186 9 14676048 to 14676054 6 - TSS region transcription start site region 88186
Tssr88187 9 14676224 to 14676251 27 - TSS region transcription start site region 88187
Gm19790 9 14679970 to 14680220 250 + pseudogene predicted gene, 19790
Gm18997 9 14693523 to 14694338 815 + pseudogene predicted gene, 18997
Piwil4 9 14701782 to 14740765 38983 - protein coding gene piwi-like RNA-mediated gene silencing 4
Tssr83843 9 14704506 to 14704515 9 + TSS region transcription start site region 83843
Tssr83844 9 14704525 to 14704551 26 + TSS region transcription start site region 83844
Gm10706 9 14704642 to 14719058 14416 + antisense lncRNA gene predicted gene 10706
Tssr88188 9 14718381 to 14718393 12 - TSS region transcription start site region 88188
Gm34651 9 14724626 to 14732081 7455 + lncRNA gene predicted gene, 34651