Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 9:14075946-14475959

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31 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
1700019J19Rik 9 14090077 to 14110535 20458 + lincRNA gene RIKEN cDNA 1700019J19 gene
Gm47559 9 14107054 to 14108123 1069 - lincRNA gene predicted gene, 47559
Gm39292 9 14146200 to 14152576 6376 - lncRNA gene predicted gene, 39292
Gm47564 9 14204083 to 14218183 14100 + lincRNA gene predicted gene, 47564
Gm47565 9 14249625 to 14250939 1314 - lincRNA gene predicted gene, 47565
Gm34069 9 14259041 to 14263803 4762 - lincRNA gene predicted gene, 34069
Cpgi21355 9 14274993 to 14275295 302 CpG island CpG island 21355
Cpgi21356 9 14275886 to 14277130 1244 CpG island CpG island 21356
Tssr2782 9 14275946 to 14275959 13 - TSS region transcription start site region 2782
Tssr88146 9 14275972 to 14275985 13 - TSS region transcription start site region 88146
Sesn3 9 14276301 to 14326134 49833 + protein coding gene sestrin 3
Tssr83832 9 14276320 to 14276347 27 + TSS region transcription start site region 83832
Tssr83833 9 14276492 to 14276501 9 + TSS region transcription start site region 83833
Tssr83834 9 14282370 to 14282373 3 + TSS region transcription start site region 83834
Gm47326 9 14335612 to 14343063 7451 + lincRNA gene predicted gene, 47326
D9Mit202 9 14342049 to 14342158 109 DNA segment DNA segment, Chr 9, Massachusetts Institute of Technology 202
Endod1 9 14353990 to 14381242 27252 - protein coding gene endonuclease domain containing 1
Tssr88147 9 14354744 to 14354752 8 - TSS region transcription start site region 88147
Gm34156 9 14367685 to 14374808 7123 + lncRNA gene predicted gene, 34156
Cpgi21357 9 14380204 to 14381311 1107 CpG island CpG island 21357
Tssr88148 9 14380973 to 14381033 60 - TSS region transcription start site region 88148
Tssr88149 9 14381036 to 14381047 11 - TSS region transcription start site region 88149
Tssr83835 9 14381053 to 14381088 35 + TSS region transcription start site region 83835
Tssr88150 9 14381157 to 14381164 7 - TSS region transcription start site region 88150
Tssr88151 9 14381490 to 14381525 35 - TSS region transcription start site region 88151
Gm47321 9 14384361 to 14385654 1293 - pseudogene predicted gene, 47321
Gm47319 9 14385692 to 14389723 4031 + lincRNA gene predicted gene, 47319
Gm47318 9 14435321 to 14435411 90 - pseudogene predicted gene, 47318
Gm47317 9 14449355 to 14449439 84 - pseudogene predicted gene, 47317
Kdm4dl 9 14451015 to 14452022 1007 - pseudogene lysine (K)-specific demethylase 4D-like
Kdm4d 9 14462548 to 14500482 37934 - protein coding gene lysine (K)-specific demethylase 4D