Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 9:13078214-13542446

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35 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
4930568E12Rik 9 13091267 to 13105855 14588 - lincRNA gene RIKEN cDNA 4930568E12 gene
Tssr88137 9 13105851 to 13105858 7 - TSS region transcription start site region 88137
Gm47051 9 13106013 to 13136998 30985 + lincRNA gene predicted gene, 47051
Tssr2762 9 13179365 to 13179386 21 + TSS region transcription start site region 2762
Jrkl 9 13242790 to 13245741 2951 - protein coding gene Jrk-like
Tssr2763 9 13246945 to 13247002 57 + TSS region transcription start site region 2763
Ccdc82 9 13246955 to 13292520 45565 + protein coding gene coiled-coil domain containing 82
Gm26189 9 13275516 to 13275622 106 + snRNA gene predicted gene, 26189
Tssr2764 9 13296584 to 13296601 17 + TSS region transcription start site region 2764
Tssr2765 9 13296621 to 13296670 49 + TSS region transcription start site region 2765
Tssr2766 9 13296681 to 13296736 55 + TSS region transcription start site region 2766
Tssr2767 9 13296737 to 13296825 88 + TSS region transcription start site region 2767
Tssr2768 9 13296839 to 13296852 13 + TSS region transcription start site region 2768
Tssr2769 9 13296964 to 13296979 15 + TSS region transcription start site region 2769
Tssr2770 9 13297952 to 13297999 47 + TSS region transcription start site region 2770
Maml2 9 13297957 to 13709388 411431 + protein coding gene mastermind like transcriptional coactivator 2
Tssr2771 9 13298131 to 13298184 53 + TSS region transcription start site region 2771
Tssr2772 9 13298185 to 13298201 16 + TSS region transcription start site region 2772
Tssr2773 9 13302913 to 13302915 2 + TSS region transcription start site region 2773
Gm47087 9 13308214 to 13312446 4232 + unclassified gene predicted gene, 47087
Tssr2774 9 13310790 to 13310830 40 + TSS region transcription start site region 2774
Tssr2775 9 13310876 to 13310889 13 + TSS region transcription start site region 2775
Tssr2776 9 13317583 to 13317589 6 + TSS region transcription start site region 2776
Tssr2777 9 13324032 to 13324055 23 + TSS region transcription start site region 2777
Tssr83803 9 13414342 to 13414388 46 + TSS region transcription start site region 83803
Dcollq1 9 13430544 to 13430544 0 QTL differential colonization level QTL 1
Phxr4 9 13431361 to 13432751 1390 + unclassified gene per-hexamer repeat gene 4
Tssr83804 9 13433149 to 13433154 5 + TSS region transcription start site region 83804
Gm17571 9 13444034 to 13446753 2719 - protein coding gene predicted gene, 17571
Tssr83805 9 13466640 to 13466649 9 + TSS region transcription start site region 83805
Tssr83806 9 13470003 to 13470009 6 + TSS region transcription start site region 83806
Tssr83807 9 13473863 to 13473867 4 + TSS region transcription start site region 83807
Tssr2778 9 13514680 to 13514695 15 + TSS region transcription start site region 2778
Tssr2779 9 13514715 to 13514744 29 + TSS region transcription start site region 2779
Gm47089 9 13519936 to 13520101 165 + unclassified gene predicted gene, 47089