MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 9:124128505-124418510

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17 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Tssr88005	9	124142302 to 124142330	28	+	TSS region	transcription start site region 88005
Tssr88006	9	124143944 to 124143967	23	+	TSS region	transcription start site region 88006
Tssr3082	9	124257613 to 124257622	9	-	TSS region	transcription start site region 3082
Gm39469	9	124270358 to 124282139	11781	-	lincRNA gene	predicted gene, 39469
Tssr3083	9	124273505 to 124273510	5	+	TSS region	transcription start site region 3083
Tssr3084	9	124281240 to 124281271	31	-	TSS region	transcription start site region 3084
Tssr3085	9	124282116 to 124282203	87	-	TSS region	transcription start site region 3085
Tssr3086	9	124282914 to 124282930	16	+	TSS region	transcription start site region 3086
2010315B03Rik	9	124291804 to 124312696	20892	-	protein coding gene	RIKEN cDNA 2010315B03 gene
Tssr3087	9	124312641 to 124312699	58	-	TSS region	transcription start site region 3087
Tssr3088	9	124316895 to 124316926	31	-	TSS region	transcription start site region 3088
Gm47180	9	124338979 to 124347160	8181	+	pseudogene	predicted gene, 47180
Gm47179	9	124340783 to 124342618	1835	-	unclassified gene	predicted gene, 47179
Gm47181	9	124344398 to 124347514	3116	-	lincRNA gene	predicted gene, 47181
Nlrp4g	9	124348831 to 124354491	5660	+	protein coding gene	NLR family, pyrin domain containing 4G
Gm47182	9	124369217 to 124369493	276	+	pseudogene	predicted gene, 47182
Tssr3089	9	124408712 to 124408742	30	+	TSS region	transcription start site region 3089