Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 9:123779573-123909584

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56 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Ccr9 9 123767211 to 123783457 16246 + protein coding gene chemokine (C-C motif) receptor 9
Tssr87949 9 123780347 to 123780355 8 + TSS region transcription start site region 87949
Tssr87950 9 123781186 to 123781198 12 + TSS region transcription start site region 87950
Tssr87951 9 123781202 to 123781249 47 + TSS region transcription start site region 87951
Tssr87952 9 123781255 to 123781306 51 + TSS region transcription start site region 87952
Tssr87953 9 123781403 to 123781420 17 + TSS region transcription start site region 87953
Tssr87954 9 123781428 to 123781440 12 + TSS region transcription start site region 87954
Tssr87955 9 123781456 to 123781472 16 + TSS region transcription start site region 87955
Tssr92156 9 123781495 to 123781504 9 - TSS region transcription start site region 92156
Tssr87956 9 123781600 to 123781621 21 + TSS region transcription start site region 87956
Tssr87957 9 123782030 to 123782037 7 + TSS region transcription start site region 87957
Fyco1 9 123789500 to 123851899 62399 - protein coding gene FYVE and coiled-coil domain containing 1
Tssr92157 9 123792054 to 123792066 12 - TSS region transcription start site region 92157
Tssr92158 9 123792069 to 123792072 3 - TSS region transcription start site region 92158
Tssr92159 9 123792077 to 123792096 19 - TSS region transcription start site region 92159
Tssr92160 9 123792470 to 123792471 1 - TSS region transcription start site region 92160
Tssr92161 9 123792487 to 123792492 5 - TSS region transcription start site region 92161
Tssr92162 9 123794825 to 123794843 18 - TSS region transcription start site region 92162
Tssr92163 9 123797586 to 123797603 17 - TSS region transcription start site region 92163
Tssr92164 9 123797959 to 123797974 15 - TSS region transcription start site region 92164
Tssr92165 9 123797979 to 123797990 11 - TSS region transcription start site region 92165
Tssr92166 9 123798122 to 123798130 8 - TSS region transcription start site region 92166
Tssr87958 9 123805536 to 123805544 8 + TSS region transcription start site region 87958
Tssr87959 9 123806468 to 123806485 17 + TSS region transcription start site region 87959
Cxcr6 9 123806477 to 123811754 5277 + protein coding gene chemokine (C-X-C motif) receptor 6
Tssr87960 9 123806491 to 123806504 13 + TSS region transcription start site region 87960
Tssr92167 9 123807746 to 123807761 15 - TSS region transcription start site region 92167
Tssr92168 9 123809042 to 123809056 14 - TSS region transcription start site region 92168
Tssr87961 9 123834363 to 123834392 29 + TSS region transcription start site region 87961
Tssr92169 9 123835977 to 123835995 18 - TSS region transcription start site region 92169
Tssr92170 9 123839836 to 123839841 5 - TSS region transcription start site region 92170
Tssr87962 9 123840641 to 123840661 20 + TSS region transcription start site region 87962
Tssr92171 9 123844573 to 123844584 11 - TSS region transcription start site region 92171
Tssr92172 9 123844588 to 123844620 32 - TSS region transcription start site region 92172
Tssr92173 9 123845188 to 123845200 12 - TSS region transcription start site region 92173
Tssr87963 9 123845437 to 123845450 13 + TSS region transcription start site region 87963
Tssr87964 9 123845454 to 123845463 9 + TSS region transcription start site region 87964
Tssr87965 9 123850286 to 123850302 16 + TSS region transcription start site region 87965
Tssr87966 9 123850321 to 123850333 12 + TSS region transcription start site region 87966
Tssr87967 9 123851038 to 123851073 35 + TSS region transcription start site region 87967
Tssr87968 9 123851248 to 123851283 35 + TSS region transcription start site region 87968
Tssr87969 9 123851284 to 123851314 30 + TSS region transcription start site region 87969
Tssr87970 9 123851324 to 123851335 11 + TSS region transcription start site region 87970
Cpgi22557 9 123851345 to 123852242 897 CpG island CpG island 22557
Tssr87971 9 123851383 to 123851431 48 + TSS region transcription start site region 87971
Tssr92174 9 123851804 to 123851815 11 - TSS region transcription start site region 92174
Tssr92175 9 123851855 to 123851912 57 - TSS region transcription start site region 92175
Tssr87972 9 123852142 to 123852208 66 + TSS region transcription start site region 87972
Xcr1 9 123852315 to 123862029 9714 - protein coding gene chemokine (C motif) receptor 1
Tssr87973 9 123853360 to 123853366 6 + TSS region transcription start site region 87973
Tssr92176 9 123862013 to 123862020 7 - TSS region transcription start site region 92176
Tssr92177 9 123862023 to 123862035 12 - TSS region transcription start site region 92177
Gm2774 9 123867808 to 123868953 1145 - pseudogene predicted gene 2774
Tssr92178 9 123872109 to 123872157 48 - TSS region transcription start site region 92178
Tssr87974 9 123872294 to 123872332 38 + TSS region transcription start site region 87974
Tssr92179 9 123872964 to 123872969 5 - TSS region transcription start site region 92179