MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 9:123500503-123530517

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17 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Limd1	9	123478706 to 123521552	42846	+	protein coding gene	LIM domains containing 1
Tssr87917	9	123509167 to 123509178	11	+	TSS region	transcription start site region 87917
Tssr87918	9	123509180 to 123509205	25	+	TSS region	transcription start site region 87918
Tssr87919	9	123509222 to 123509236	14	+	TSS region	transcription start site region 87919
Tssr87920	9	123509260 to 123509287	27	+	TSS region	transcription start site region 87920
Tssr87921	9	123510049 to 123510069	20	+	TSS region	transcription start site region 87921
Tssr3058	9	123510485 to 123510516	31	+	TSS region	transcription start site region 3058
Tssr87922	9	123510524 to 123510536	12	+	TSS region	transcription start site region 87922
Tssr87923	9	123515503 to 123515517	14	+	TSS region	transcription start site region 87923
Tssr87924	9	123520590 to 123520611	21	+	TSS region	transcription start site region 87924
Cpgi22554	9	123528916 to 123530373	1457		CpG island	CpG island 22554
n-TRacg2	9	123529425 to 123529497	72	-	tRNA gene	nuclear encoded tRNA arginine 2 (anticodon ACG)
Tssr92139	9	123529571 to 123529611	40	-	TSS region	transcription start site region 92139
Tssr87925	9	123529745 to 123529756	11	+	TSS region	transcription start site region 87925
Tssr87926	9	123529777 to 123529837	60	+	TSS region	transcription start site region 87926
Tssr87927	9	123529843 to 123529859	16	+	TSS region	transcription start site region 87927
Sacm1l	9	123529882 to 123592600	62718	+	protein coding gene	SAC1 suppressor of actin mutations 1-like (yeast)