Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 9:123266921-123466953

16 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Gm47162	9	123307084 to 123307983	899	+	lincRNA gene	predicted gene, 47162
Scp2-ps2	9	123307508 to 123307986	478	-	pseudogene	sterol carrier protein 2, pseudogene 2
Tssr92137	9	123307938 to 123307957	19	-	TSS region	transcription start site region 92137
Tssr92138	9	123307976 to 123307989	13	-	TSS region	transcription start site region 92138
Cpgi22551	9	123366739 to 123367233	494		CpG island	CpG island 22551
Tssr87907	9	123366921 to 123366953	32	+	TSS region	transcription start site region 87907
Lars2	9	123366927 to 123462666	95739	+	protein coding gene	leucyl-tRNA synthetase, mitochondrial
Gm46137	9	123381659 to 123390477	8818	+	lncRNA gene	predicted gene, 46137
Tssr87908	9	123461896 to 123461910	14	+	TSS region	transcription start site region 87908
Tssr87909	9	123461928 to 123461984	56	+	TSS region	transcription start site region 87909
Cpgi22552	9	123461958 to 123462186	228		CpG island	CpG island 22552
Tssr87910	9	123461993 to 123462000	7	+	TSS region	transcription start site region 87910
Tssr87911	9	123462075 to 123462090	15	+	TSS region	transcription start site region 87911
Tssr87912	9	123462096 to 123462103	7	+	TSS region	transcription start site region 87912
Tssr87913	9	123462140 to 123462166	26	+	TSS region	transcription start site region 87913
Gm40586	9	123464208 to 123470014	5806	+	lncRNA gene	predicted gene, 40586