Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 9:123221739-123512233

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33 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tmem158 9 123259053 to 123260764 1711 - protein coding gene transmembrane protein 158
Cpgi22550 9 123259373 to 123261088 1715 CpG island CpG island 22550
Tssr92134 9 123260756 to 123260773 17 - TSS region transcription start site region 92134
Tssr92135 9 123260776 to 123260803 27 - TSS region transcription start site region 92135
Tssr92136 9 123260814 to 123260822 8 - TSS region transcription start site region 92136
Gm47162 9 123307084 to 123307983 899 + lincRNA gene predicted gene, 47162
Scp2-ps2 9 123307508 to 123307986 478 - pseudogene sterol carrier protein 2, pseudogene 2
Tssr92137 9 123307938 to 123307957 19 - TSS region transcription start site region 92137
Tssr92138 9 123307976 to 123307989 13 - TSS region transcription start site region 92138
Cpgi22551 9 123366739 to 123367233 494 CpG island CpG island 22551
Tssr87907 9 123366921 to 123366953 32 + TSS region transcription start site region 87907
Lars2 9 123366927 to 123462666 95739 + protein coding gene leucyl-tRNA synthetase, mitochondrial
Gm46137 9 123381659 to 123390477 8818 + lncRNA gene predicted gene, 46137
Tssr87908 9 123461896 to 123461910 14 + TSS region transcription start site region 87908
Tssr87909 9 123461928 to 123461984 56 + TSS region transcription start site region 87909
Cpgi22552 9 123461958 to 123462186 228 CpG island CpG island 22552
Tssr87910 9 123461993 to 123462000 7 + TSS region transcription start site region 87910
Tssr87911 9 123462075 to 123462090 15 + TSS region transcription start site region 87911
Tssr87912 9 123462096 to 123462103 7 + TSS region transcription start site region 87912
Tssr87913 9 123462140 to 123462166 26 + TSS region transcription start site region 87913
Gm40586 9 123464208 to 123470014 5806 + lncRNA gene predicted gene, 40586
Cpgi22553 9 123478101 to 123479491 1390 CpG island CpG island 22553
Tssr87914 9 123478657 to 123478681 24 + TSS region transcription start site region 87914
Tssr87915 9 123478693 to 123478733 40 + TSS region transcription start site region 87915
Limd1 9 123478706 to 123521552 42846 + protein coding gene LIM domains containing 1
Tssr87916 9 123478738 to 123478782 44 + TSS region transcription start site region 87916
Tssr87917 9 123509167 to 123509178 11 + TSS region transcription start site region 87917
Tssr87918 9 123509180 to 123509205 25 + TSS region transcription start site region 87918
Tssr87919 9 123509222 to 123509236 14 + TSS region transcription start site region 87919
Tssr87920 9 123509260 to 123509287 27 + TSS region transcription start site region 87920
Tssr87921 9 123510049 to 123510069 20 + TSS region transcription start site region 87921
Tssr3058 9 123510485 to 123510516 31 + TSS region transcription start site region 3058
Tssr87922 9 123510524 to 123510536 12 + TSS region transcription start site region 87922