Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 9:122697346-122852074

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25 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm47136 9 122687068 to 122714333 27265 - lincRNA gene predicted gene, 47136
D9Mit52 9 122702676 to 122702847 171 DNA segment DNA segment, Chr 9, Massachusetts Institute of Technology 52
Gm47137 9 122715203 to 122715364 161 + pseudogene predicted gene, 47137
Tssr87855 9 122739278 to 122739284 6 + TSS region transcription start site region 87855
Cpgi22538 9 122747070 to 122747580 510 CpG island CpG island 22538
Tssr87856 9 122747193 to 122747223 30 + TSS region transcription start site region 87856
Tssr87857 9 122747224 to 122747241 17 + TSS region transcription start site region 87857
Tssr87858 9 122747261 to 122747264 3 + TSS region transcription start site region 87858
Topaz1 9 122747346 to 122802074 54728 + protein coding gene testis and ovary specific PAZ domain containing 1
Cpgi22539 9 122805385 to 122806055 670 CpG island CpG island 22539
Tssr92101 9 122805421 to 122805432 11 - TSS region transcription start site region 92101
Tssr92102 9 122805439 to 122805456 17 - TSS region transcription start site region 92102
Tssr92103 9 122805459 to 122805475 16 - TSS region transcription start site region 92103
Tssr87859 9 122805524 to 122805580 56 + TSS region transcription start site region 87859
Tcaim 9 122805539 to 122836334 30795 + protein coding gene T cell activation inhibitor, mitochondrial
Tssr87860 9 122805591 to 122805625 34 + TSS region transcription start site region 87860
Tssr87861 9 122805626 to 122805668 42 + TSS region transcription start site region 87861
Gm25341 9 122812564 to 122812831 267 + unclassified non-coding RNA gene predicted gene, 25341
Cpgi22540 9 122837921 to 122838119 198 CpG island CpG island 22540
Gm35549 9 122838164 to 122845227 7063 - protein coding gene predicted gene, 35549
Tssr92104 9 122843976 to 122843985 9 - TSS region transcription start site region 92104
Tssr92105 9 122843994 to 122844001 7 - TSS region transcription start site region 92105
Tssr92106 9 122844014 to 122844027 13 - TSS region transcription start site region 92106
Zfp445 9 122844529 to 122866006 21477 - protein coding gene zinc finger protein 445
Gm47140 9 122847019 to 122848418 1399 - sense intronic lncRNA gene predicted gene, 47140