Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 9:122411271-122611611

18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Tssr87844	9	122421302 to 122421307	5	+	TSS region	transcription start site region 87844
Tssr87845	9	122422120 to 122422128	8	+	TSS region	transcription start site region 87845
Gm47128	9	122422136 to 122423376	1240	+	lincRNA gene	predicted gene, 47128
Gm35454	9	122435882 to 122438117	2235	-	lincRNA gene	predicted gene, 35454
Tssr3055	9	122438111 to 122438136	25	-	TSS region	transcription start site region 3055
Gm47129	9	122478750 to 122479262	512	+	pseudogene	predicted gene, 47129
Gm47130	9	122511271 to 122511611	340	-	pseudogene	predicted gene, 47130
D9Mit351.2	9	122511290 to 122511418	128		DNA segment	DNA segment, Chr 9, Massachusetts Institute of Technology 351.2
D9Mit351	9	122511457 to 122511566	109		DNA segment	DNA Segment, Chr 9 Massachusetts Institute of Technology 351
Gm47131	9	122512549 to 122513598	1049	-	lincRNA gene	predicted gene, 47131
Gm47133	9	122531746 to 122535020	3274	-	lincRNA gene	predicted gene, 47133
Cpgi22535	9	122568588 to 122570487	1899		CpG island	CpG island 22535
Tssr87846	9	122569088 to 122569090	2	+	TSS region	transcription start site region 87846
Cpgi22536	9	122571194 to 122572941	1747		CpG island	CpG island 22536
Tssr87847	9	122572493 to 122572511	18	+	TSS region	transcription start site region 87847
9530059O14Rik	9	122572501 to 122580647	8146	+	lincRNA gene	RIKEN cDNA 9530059O14 gene
Cpgi22537	9	122595242 to 122595680	438		CpG island	CpG island 22537
Tssr87848	9	122601155 to 122601163	8	+	TSS region	transcription start site region 87848