Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 9:121861047-122041087

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28 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm47113 9 121869496 to 121879936 10440 + lincRNA gene predicted gene, 47113
Cpgi22527 9 121890699 to 121890876 177 CpG island CpG island 22527
Ackr2 9 121898355 to 121911074 12719 + protein coding gene atypical chemokine receptor 2
Tssr87821 9 121898409 to 121898423 14 + TSS region transcription start site region 87821
Tssr87822 9 121898458 to 121898466 8 + TSS region transcription start site region 87822
Cyp8b1 9 121914356 to 121916305 1949 - protein coding gene cytochrome P450, family 8, subfamily b, polypeptide 1
Tssr92081 9 121914680 to 121914701 21 - TSS region transcription start site region 92081
Tssr92082 9 121914819 to 121914864 45 - TSS region transcription start site region 92082
Tssr92083 9 121915175 to 121915184 9 - TSS region transcription start site region 92083
Tssr92084 9 121916288 to 121916315 27 - TSS region transcription start site region 92084
Gm47115 9 121934080 to 121935402 1322 + pseudogene predicted gene, 47115
1700048O20Rik 9 121937275 to 121947016 9741 + lincRNA gene RIKEN cDNA 1700048O20 gene
Tssr87823 9 121937285 to 121937297 12 + TSS region transcription start site region 87823
Tssr87824 9 121937777 to 121937805 28 + TSS region transcription start site region 87824
Gm49343 9 121937973 to 121965089 27116 + lincRNA gene predicted gene, 49343
Cpgi22528 9 121938005 to 121938420 415 CpG island CpG island 22528
Tssr87825 9 121938099 to 121938126 27 + TSS region transcription start site region 87825
Gask1a 9 121950988 to 121980209 29221 + protein coding gene golgi associated kinase 1A
Tssr87826 9 121951008 to 121951044 36 + TSS region transcription start site region 87826
Tssr87827 9 121951047 to 121951087 40 + TSS region transcription start site region 87827
Pomgnt2 9 121981606 to 121996026 14420 - protein coding gene protein O-linked mannose beta 1,4-N-acetylglucosaminyltransferase 2
Cpgi22529 9 121982109 to 121983800 1691 CpG island CpG island 22529
Cpgi22530 9 121995409 to 121996110 701 CpG island CpG island 22530
Tssr92085 9 121995962 to 121996041 79 - TSS region transcription start site region 92085
Tssr87828 9 121996097 to 121996115 18 + TSS region transcription start site region 87828
Gm39463 9 121996118 to 122012455 16337 + antisense lncRNA gene predicted gene, 39463
Gm47117 9 122008354 to 122012140 3786 - lincRNA gene predicted gene, 47117
Gm39465 9 122029509 to 122051534 22025 - lincRNA gene predicted gene, 39465