MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 9:121832557-121882572

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Ccdc13	9	121797627 to 121839461	41834	-	protein coding gene	coiled-coil domain containing 13
Cpgi22525	9	121838827 to 121839666	839		CpG island	CpG island 22525
Tssr92072	9	121839424 to 121839439	15	-	TSS region	transcription start site region 92072
Tssr92073	9	121839460 to 121839465	5	-	TSS region	transcription start site region 92073
Tssr92074	9	121839470 to 121839497	27	-	TSS region	transcription start site region 92074
Tssr92075	9	121839507 to 121839512	5	-	TSS region	transcription start site region 92075
Gm47111	9	121843822 to 121846937	3115	-	unclassified gene	predicted gene, 47111
Tssr92076	9	121847018 to 121847022	4	-	TSS region	transcription start site region 92076
Higd1a	9	121848560 to 121858357	9797	-	protein coding gene	HIG1 domain family, member 1A
Cpgi22526	9	121856947 to 121858302	1355		CpG island	CpG island 22526
Tssr92077	9	121857557 to 121857572	15	-	TSS region	transcription start site region 92077
Tssr92078	9	121857576 to 121857633	57	-	TSS region	transcription start site region 92078
Gm47112	9	121857680 to 121859209	1529	+	antisense lncRNA gene	predicted gene, 47112
Tssr87819	9	121857732 to 121857752	20	+	TSS region	transcription start site region 87819
Tssr87820	9	121857761 to 121857768	7	+	TSS region	transcription start site region 87820
Tssr92079	9	121857894 to 121857948	54	-	TSS region	transcription start site region 92079
Tssr92080	9	121857952 to 121858012	60	-	TSS region	transcription start site region 92080
Gm47113	9	121869496 to 121879936	10440	+	lincRNA gene	predicted gene, 47113