Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 9:121712712-121842723

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41 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Ss18l2 9 121710389 to 121712921 2532 + protein coding gene SS18, nBAF chromatin remodeling complex subunit like 2
Cpgi22522 9 121718670 to 121720344 1674 CpG island CpG island 22522
Tssr92063 9 121718858 to 121718892 34 - TSS region transcription start site region 92063
Tssr92064 9 121718927 to 121719013 86 - TSS region transcription start site region 92064
Tssr87805 9 121719124 to 121719137 13 + TSS region transcription start site region 87805
Tssr87806 9 121719154 to 121719166 12 + TSS region transcription start site region 87806
Nktr 9 121719169 to 121756843 37674 + protein coding gene natural killer tumor recognition sequence
Tssr87807 9 121719172 to 121719278 106 + TSS region transcription start site region 87807
Tssr87808 9 121719287 to 121719305 18 + TSS region transcription start site region 87808
Tssr87809 9 121719403 to 121719471 68 + TSS region transcription start site region 87809
Tssr87810 9 121719842 to 121719846 4 + TSS region transcription start site region 87810
Tssr92065 9 121720088 to 121720093 5 - TSS region transcription start site region 92065
Tssr87811 9 121720566 to 121720569 3 + TSS region transcription start site region 87811
Tssr87812 9 121730666 to 121730705 39 + TSS region transcription start site region 87812
Tssr87813 9 121746523 to 121746552 29 + TSS region transcription start site region 87813
Tssr87814 9 121748047 to 121748068 21 + TSS region transcription start site region 87814
E530011L22Rik 9 121756640 to 121759943 3303 - antisense lncRNA gene RIKEN cDNA E530011L22 gene
Cpgi22523 9 121758919 to 121761015 2096 CpG island CpG island 22523
Zfp651 9 121759330 to 121771742 12412 + protein coding gene zinc finger protein 651
Tssr87815 9 121759732 to 121759767 35 + TSS region transcription start site region 87815
Tssr92066 9 121759903 to 121759920 17 - TSS region transcription start site region 92066
Tssr87816 9 121760000 to 121760061 61 + TSS region transcription start site region 87816
Gm47108 9 121775024 to 121778146 3122 - unclassified gene predicted gene, 47108
Klhl40 9 121777607 to 121783818 6211 + protein coding gene kelch-like 40
Cpgi22524 9 121777667 to 121779034 1367 CpG island CpG island 22524
Tssr87817 9 121777684 to 121777701 17 + TSS region transcription start site region 87817
Tssr87818 9 121777712 to 121777723 11 + TSS region transcription start site region 87818
Hhatl 9 121784016 to 121792507 8491 - protein coding gene hedgehog acyltransferase-like
Tssr92067 9 121791083 to 121791090 7 - TSS region transcription start site region 92067
Tssr92068 9 121792331 to 121792389 58 - TSS region transcription start site region 92068
Tssr92069 9 121792416 to 121792426 10 - TSS region transcription start site region 92069
Tssr92070 9 121792478 to 121792490 12 - TSS region transcription start site region 92070
Ccdc13 9 121797627 to 121839461 41834 - protein coding gene coiled-coil domain containing 13
Tssr92071 9 121809811 to 121809824 13 - TSS region transcription start site region 92071
D9Mit152 9 121812590 to 121812724 134 DNA segment DNA segment, Chr 9, Massachusetts Institute of Technology 152
Gm17163 9 121820289 to 121831193 10904 + antisense lncRNA gene predicted gene 17163
Cpgi22525 9 121838827 to 121839666 839 CpG island CpG island 22525
Tssr92072 9 121839424 to 121839439 15 - TSS region transcription start site region 92072
Tssr92073 9 121839460 to 121839465 5 - TSS region transcription start site region 92073
Tssr92074 9 121839470 to 121839497 27 - TSS region transcription start site region 92074
Tssr92075 9 121839507 to 121839512 5 - TSS region transcription start site region 92075