MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 9:121512030-121672041

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Gm47095	9	121515665 to 121536151	20486	-	lincRNA gene	predicted gene, 47095
Gm38661	9	121522968 to 121528157	5189	+	lincRNA gene	predicted gene, 38661
Lyzl4	9	121577841 to 121641566	63725	-	protein coding gene	lysozyme-like 4
Tssr92051	9	121586935 to 121586946	11	-	TSS region	transcription start site region 92051
Tssr92052	9	121586948 to 121586966	18	-	TSS region	transcription start site region 92052
Tssr87789	9	121586994 to 121587005	11	+	TSS region	transcription start site region 87789
Tssr87790	9	121587016 to 121587046	30	+	TSS region	transcription start site region 87790
Lyzl4os	9	121587020 to 121614255	27235	+	antisense lncRNA gene	lysozyme-like 4, opposite strand
Tssr92053	9	121592030 to 121592041	11	-	TSS region	transcription start site region 92053
Tssr92054	9	121592066 to 121592082	16	-	TSS region	transcription start site region 92054
Tssr92055	9	121597209 to 121597215	6	-	TSS region	transcription start site region 92055
Tssr87791	9	121599799 to 121599804	5	+	TSS region	transcription start site region 87791
Gm47097	9	121629891 to 121631370	1479	-	unclassified gene	predicted gene, 47097
Cpgi22518	9	121641505 to 121643273	1768		CpG island	CpG island 22518
Vipr1	9	121642716 to 121672954	30238	+	protein coding gene	vasoactive intestinal peptide receptor 1
Tssr87792	9	121642726 to 121642757	31	+	TSS region	transcription start site region 87792
Tssr87793	9	121642768 to 121642783	15	+	TSS region	transcription start site region 87793
Cpgi22519	9	121669266 to 121669872	606		CpG island	CpG island 22519