Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 9:121417968-121633157

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34 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Trak1 9 121297507 to 121474919 177412 + protein coding gene trafficking protein, kinesin binding 1
Cpgi22515 9 121443701 to 121444146 445 CpG island CpG island 22515
Cpgi22516 9 121446603 to 121446826 223 CpG island CpG island 22516
Tssr92042 9 121452469 to 121452475 6 - TSS region transcription start site region 92042
Tssr87783 9 121452832 to 121452863 31 + TSS region transcription start site region 87783
Tssr92043 9 121454659 to 121454678 19 - TSS region transcription start site region 92043
Tssr92044 9 121454739 to 121454744 5 - TSS region transcription start site region 92044
Tssr87784 9 121460230 to 121460239 9 + TSS region transcription start site region 87784
Tssr87785 9 121460252 to 121460272 20 + TSS region transcription start site region 87785
Tssr87786 9 121460280 to 121460305 25 + TSS region transcription start site region 87786
Tssr87787 9 121472461 to 121472465 4 + TSS region transcription start site region 87787
D9Mit151 9 121477874 to 121477987 113 DNA segment DNA segment, Chr 9, Massachusetts Institute of Technology 151
Cck 9 121489824 to 121495694 5870 - protein coding gene cholecystokinin
Tssr87788 9 121489960 to 121489966 6 + TSS region transcription start site region 87788
Tssr92045 9 121489999 to 121490010 11 - TSS region transcription start site region 92045
Tssr92046 9 121490011 to 121490037 26 - TSS region transcription start site region 92046
Cpgi22517 9 121494118 to 121494758 640 CpG island CpG island 22517
Tssr92047 9 121494849 to 121494865 16 - TSS region transcription start site region 92047
Tssr92048 9 121495651 to 121495672 21 - TSS region transcription start site region 92048
Tssr92049 9 121495678 to 121495689 11 - TSS region transcription start site region 92049
Tssr92050 9 121495708 to 121495714 6 - TSS region transcription start site region 92050
Gm47095 9 121515665 to 121536151 20486 - lincRNA gene predicted gene, 47095
Gm38661 9 121522968 to 121528157 5189 + lincRNA gene predicted gene, 38661
Lyzl4 9 121577841 to 121641566 63725 - protein coding gene lysozyme-like 4
Tssr92051 9 121586935 to 121586946 11 - TSS region transcription start site region 92051
Tssr92052 9 121586948 to 121586966 18 - TSS region transcription start site region 92052
Tssr87789 9 121586994 to 121587005 11 + TSS region transcription start site region 87789
Tssr87790 9 121587016 to 121587046 30 + TSS region transcription start site region 87790
Lyzl4os 9 121587020 to 121614255 27235 + antisense lncRNA gene lysozyme-like 4, opposite strand
Tssr92053 9 121592030 to 121592041 11 - TSS region transcription start site region 92053
Tssr92054 9 121592066 to 121592082 16 - TSS region transcription start site region 92054
Tssr92055 9 121597209 to 121597215 6 - TSS region transcription start site region 92055
Tssr87791 9 121599799 to 121599804 5 + TSS region transcription start site region 87791
Gm47097 9 121629891 to 121631370 1479 - unclassified gene predicted gene, 47097