Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 9:120636465-120946785

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39 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr87751 9 120658008 to 120658024 16 + TSS region transcription start site region 87751
Cpgi22506 9 120660801 to 120661013 212 CpG island CpG island 22506
Gm39457 9 120672070 to 120675310 3240 + lncRNA gene predicted gene, 39457
Gm39458 9 120675443 to 120682465 7022 + lncRNA gene predicted gene, 39458
Tssr92028 9 120679841 to 120679846 5 - TSS region transcription start site region 92028
Gm47063 9 120705889 to 120706237 348 - unclassified gene predicted gene, 47063
Tssr92029 9 120743194 to 120743200 6 - TSS region transcription start site region 92029
Gm47064 9 120743590 to 120751143 7553 - lincRNA gene predicted gene, 47064
Gm18101 9 120754978 to 120755525 547 - pseudogene predicted gene, 18101
Tssr92030 9 120755616 to 120755644 28 - TSS region transcription start site region 92030
D9Mit121 9 120772549 to 120772675 126 DNA segment DNA Segment, Chr 9, Massachusetts Institute of Technology 121
Tssr92031 9 120789805 to 120789810 5 - TSS region transcription start site region 92031
Gm23624 9 120791465 to 120791785 320 - unclassified non-coding RNA gene predicted gene, 23624
Gm47066 9 120791986 to 120794882 2896 + lincRNA gene predicted gene, 47066
Tssr92032 9 120807036 to 120807039 3 - TSS region transcription start site region 92032
Cpgi22507 9 120818718 to 120818929 211 CpG island CpG island 22507
Tssr87752 9 120821109 to 120821115 6 + TSS region transcription start site region 87752
Cpgi22508 9 120833907 to 120834166 259 CpG island CpG island 22508
Gm39459 9 120834369 to 120844825 10456 + lincRNA gene predicted gene, 39459
Gm47068 9 120843445 to 120846181 2736 - lincRNA gene predicted gene, 47068
Gm47069 9 120849207 to 120853103 3896 + lincRNA gene predicted gene, 47069
Gm19385 9 120861615 to 120866756 5141 - lincRNA gene predicted gene, 19385
Tssr92033 9 120866540 to 120866549 9 - TSS region transcription start site region 92033
Tssr87753 9 120867070 to 120867096 26 + TSS region transcription start site region 87753
Gm34425 9 120869961 to 120872284 2323 + lincRNA gene predicted gene, 34425
Gm47070 9 120869984 to 120871030 1046 - lincRNA gene predicted gene, 47070
Gm39460 9 120879783 to 120881978 2195 - lincRNA gene predicted gene, 39460
Cpgi22509 9 120881123 to 120881406 283 CpG island CpG island 22509
1700020M21Rik 9 120913774 to 120915250 1476 - lincRNA gene RIKEN cDNA 1700020M21 gene
Tssr92034 9 120919326 to 120919337 11 - TSS region transcription start site region 92034
4930593C16Rik 9 120924455 to 120930802 6347 - antisense lncRNA gene RIKEN cDNA 4930593C16 gene
Gm38502 9 120928533 to 120930209 1676 + lncRNA gene predicted gene, 38502
Tssr87754 9 120929240 to 120929251 11 + TSS region transcription start site region 87754
Tssr87755 9 120929258 to 120929268 10 + TSS region transcription start site region 87755
Cpgi22510 9 120932881 to 120934528 1647 CpG island CpG island 22510
Ctnnb1 9 120933400 to 120960507 27107 + protein coding gene catenin (cadherin associated protein), beta 1
Tssr87756 9 120933483 to 120933491 8 + TSS region transcription start site region 87756
Tssr87757 9 120933838 to 120933862 24 + TSS region transcription start site region 87757
Tssr87758 9 120933877 to 120933910 33 + TSS region transcription start site region 87758