Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 9:120525443-120832465

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38 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi22500 9 120539651 to 120540070 419 CpG island CpG island 22500
Tssr87744 9 120539801 to 120539864 63 + TSS region transcription start site region 87744
Entpd3 9 120539818 to 120568327 28509 + protein coding gene ectonucleoside triphosphate diphosphohydrolase 3
Tssr87745 9 120539876 to 120539886 10 + TSS region transcription start site region 87745
Tssr87746 9 120555585 to 120555588 3 + TSS region transcription start site region 87746
Tssr87747 9 120555599 to 120555623 24 + TSS region transcription start site region 87747
Tssr87748 9 120555638 to 120555647 9 + TSS region transcription start site region 87748
Cpgi22501 9 120571117 to 120572307 1190 CpG island CpG island 22501
Tssr92026 9 120571361 to 120571375 14 - TSS region transcription start site region 92026
Tssr92027 9 120571387 to 120571420 33 - TSS region transcription start site region 92027
Tssr87749 9 120571476 to 120571487 11 + TSS region transcription start site region 87749
Tssr87750 9 120571498 to 120571522 24 + TSS region transcription start site region 87750
Rpl14 9 120571517 to 120574653 3136 + protein coding gene ribosomal protein L14
Cpgi22502 9 120577069 to 120577849 780 CpG island CpG island 22502
5830454E08Rik 9 120577331 to 120578073 742 + lincRNA gene RIKEN cDNA 5830454E08 gene
Gm47062 9 120580135 to 120582738 2603 + pseudogene predicted gene, 47062
Cpgi22503 9 120583016 to 120583246 230 CpG island CpG island 22503
Cpgi22504 9 120602829 to 120603015 186 CpG island CpG island 22504
Gm34323 9 120603732 to 120611663 7931 + lncRNA gene predicted gene, 34323
Gm39456 9 120611654 to 120620299 8645 - lincRNA gene predicted gene, 39456
Cpgi22505 9 120619669 to 120620032 363 CpG island CpG island 22505
Tssr87751 9 120658008 to 120658024 16 + TSS region transcription start site region 87751
Cpgi22506 9 120660801 to 120661013 212 CpG island CpG island 22506
Gm39457 9 120672070 to 120675310 3240 + lncRNA gene predicted gene, 39457
Gm39458 9 120675443 to 120682465 7022 + lncRNA gene predicted gene, 39458
Tssr92028 9 120679841 to 120679846 5 - TSS region transcription start site region 92028
Gm47063 9 120705889 to 120706237 348 - unclassified gene predicted gene, 47063
Tssr92029 9 120743194 to 120743200 6 - TSS region transcription start site region 92029
Gm47064 9 120743590 to 120751143 7553 - lincRNA gene predicted gene, 47064
Gm18101 9 120754978 to 120755525 547 - pseudogene predicted gene, 18101
Tssr92030 9 120755616 to 120755644 28 - TSS region transcription start site region 92030
D9Mit121 9 120772549 to 120772675 126 DNA segment DNA Segment, Chr 9, Massachusetts Institute of Technology 121
Tssr92031 9 120789805 to 120789810 5 - TSS region transcription start site region 92031
Gm23624 9 120791465 to 120791785 320 - unclassified non-coding RNA gene predicted gene, 23624
Gm47066 9 120791986 to 120794882 2896 + lincRNA gene predicted gene, 47066
Tssr92032 9 120807036 to 120807039 3 - TSS region transcription start site region 92032
Cpgi22507 9 120818718 to 120818929 211 CpG island CpG island 22507
Tssr87752 9 120821109 to 120821115 6 + TSS region transcription start site region 87752