MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 9:120233965-120374021

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19 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Gm38642	9	120214593 to 120257042	42449	+	lncRNA gene	predicted gene, 38642
Gm47059	9	120259628 to 120264358	4730	+	lincRNA gene	predicted gene, 47059
Pbwg4	9	120289445 to 120289624	179		QTL	postnatal body weight growth 4
Pvacm1l	9	120289445 to 120289624	179		QTL	plasma vascular cell adhesion molecule 1 levels
D9Mit18	9	120289445 to 120289624	179		DNA segment	DNA segment, Chr 9, Massachusetts Institute of Technology 18
Berr3	9	120289445 to 120289624	179		QTL	berghei resistance locus 3
D9Dcr135	9	120289474 to 120289578	104		DNA segment	DNA segment, Chr 9, Derry C. Roopenian 135
Dob2	9	120289624 to 86239845	-34049779		QTL	dietary obesity 2
Myrip	9	120302956 to 120476101	173145	+	protein coding gene	myosin VIIA and Rab interacting protein
Cpgi22498	9	120303012 to 120305013	2001		CpG island	CpG island 22498
Tssr87731	9	120303896 to 120303960	64	+	TSS region	transcription start site region 87731
Tssr87732	9	120303965 to 120304021	56	+	TSS region	transcription start site region 87732
Tssr92025	9	120306037 to 120306049	12	-	TSS region	transcription start site region 92025
Gm15566	9	120316328 to 120316917	589	+	pseudogene	predicted gene 15566
Gm34159	9	120344752 to 120363759	19007	-	lncRNA gene	predicted gene, 34159
D9Mit19	9	120362769 to 120362868	99		DNA segment	DNA segment, Chr 9, Massachusetts Institute of Technology 19
W10q13	9	120362868 to 63332429	-57030439		QTL	weight 10 weeks QTL 13
Tailaq2	9	120362868 to 63332429	-57030439		QTL	tail length adjusted QTL 2
Splq4	9	120362868 to 63332429	-57030439		QTL	spleen weight QTL 4