Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 9:120128965-120479021

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57 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Rpsa 9 120127766 to 120132369 4603 + protein coding gene ribosomal protein SA
Gm26448 9 120129351 to 120129553 202 + snoRNA gene predicted gene, 26448
Snora62 9 120130434 to 120130563 129 + snoRNA gene small nucleolar RNA, H/ACA box 62
Gm5922 9 120133462 to 120135371 1909 - lincRNA gene predicted gene 5922
Tssr92016 9 120135021 to 120135026 5 - TSS region transcription start site region 92016
Tssr92017 9 120135032 to 120135042 10 - TSS region transcription start site region 92017
Tssr92018 9 120135790 to 120135797 7 - TSS region transcription start site region 92018
Tssr92019 9 120135814 to 120135826 12 - TSS region transcription start site region 92019
Tssr92020 9 120135830 to 120135851 21 - TSS region transcription start site region 92020
Tssr92021 9 120135927 to 120135936 9 - TSS region transcription start site region 92021
Tssr92022 9 120136311 to 120136329 18 - TSS region transcription start site region 92022
Tssr92023 9 120136335 to 120136350 15 - TSS region transcription start site region 92023
Mobp 9 120149690 to 120181329 31639 + protein coding gene myelin-associated oligodendrocytic basic protein
Tssr87716 9 120149733 to 120149748 15 + TSS region transcription start site region 87716
Cpgi22494 9 120164019 to 120164221 202 CpG island CpG island 22494
Tssr87717 9 120168386 to 120168394 8 + TSS region transcription start site region 87717
Cpgi22495 9 120174182 to 120174531 349 CpG island CpG island 22495
Tssr87718 9 120174889 to 120174900 11 + TSS region transcription start site region 87718
Tssr87719 9 120174962 to 120174976 14 + TSS region transcription start site region 87719
Tssr87720 9 120175026 to 120175044 18 + TSS region transcription start site region 87720
Tssr87721 9 120175475 to 120175485 10 + TSS region transcription start site region 87721
Tssr87722 9 120179665 to 120179677 12 + TSS region transcription start site region 87722
Tssr87723 9 120179716 to 120179727 11 + TSS region transcription start site region 87723
Tssr87724 9 120179864 to 120179873 9 + TSS region transcription start site region 87724
Tssr87725 9 120179903 to 120179914 11 + TSS region transcription start site region 87725
Tssr87726 9 120179930 to 120179941 11 + TSS region transcription start site region 87726
Tssr87727 9 120180014 to 120180026 12 + TSS region transcription start site region 87727
Tssr87728 9 120180039 to 120180052 13 + TSS region transcription start site region 87728
Tssr87729 9 120180262 to 120180277 15 + TSS region transcription start site region 87729
Tssr87730 9 120180285 to 120180298 13 + TSS region transcription start site region 87730
Tssr92024 9 120180421 to 120180464 43 - TSS region transcription start site region 92024
Cpgi22496 9 120180654 to 120180852 198 CpG island CpG island 22496
Gm37111 9 120182564 to 120183197 633 + unclassified gene predicted gene, 37111
Cpgi22497 9 120191196 to 120191398 202 CpG island CpG island 22497
Gm38642 9 120214593 to 120257042 42449 + lncRNA gene predicted gene, 38642
Gm47059 9 120259628 to 120264358 4730 + lincRNA gene predicted gene, 47059
Berr3 9 120289445 to 120289624 179 QTL berghei resistance locus 3
Pbwg4 9 120289445 to 120289624 179 QTL postnatal body weight growth 4
Pvacm1l 9 120289445 to 120289624 179 QTL plasma vascular cell adhesion molecule 1 levels
D9Mit18 9 120289445 to 120289624 179 DNA segment DNA segment, Chr 9, Massachusetts Institute of Technology 18
D9Dcr135 9 120289474 to 120289578 104 DNA segment DNA segment, Chr 9, Derry C. Roopenian 135
Dob2 9 120289624 to 86239845 -34049779 QTL dietary obesity 2
Myrip 9 120302956 to 120476101 173145 + protein coding gene myosin VIIA and Rab interacting protein
Cpgi22498 9 120303012 to 120305013 2001 CpG island CpG island 22498
Tssr87731 9 120303896 to 120303960 64 + TSS region transcription start site region 87731
Tssr87732 9 120303965 to 120304021 56 + TSS region transcription start site region 87732
Tssr92025 9 120306037 to 120306049 12 - TSS region transcription start site region 92025
Gm15566 9 120316328 to 120316917 589 + pseudogene predicted gene 15566
Gm34159 9 120344752 to 120363759 19007 - lncRNA gene predicted gene, 34159
D9Mit19 9 120362769 to 120362868 99 DNA segment DNA segment, Chr 9, Massachusetts Institute of Technology 19
Tailaq2 9 120362868 to 63332429 -57030439 QTL tail length adjusted QTL 2
Splq4 9 120362868 to 63332429 -57030439 QTL spleen weight QTL 4
W10q13 9 120362868 to 63332429 -57030439 QTL weight 10 weeks QTL 13
Tssr87733 9 120384850 to 120384857 7 + TSS region transcription start site region 87733
Gm15565 9 120384911 to 120385337 426 + pseudogene predicted gene 15565
Tssr87734 9 120401917 to 120401918 1 + TSS region transcription start site region 87734
Tssr87735 9 120470341 to 120470354 13 + TSS region transcription start site region 87735