Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 9:120051379-120131427

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30 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cx3cr1 9 120048683 to 120068296 19613 - protein coding gene chemokine (C-X3-C motif) receptor 1
Tssr92010 9 120056322 to 120056327 5 - TSS region transcription start site region 92010
Tssr92011 9 120068263 to 120068291 28 - TSS region transcription start site region 92011
Tssr92012 9 120068292 to 120068301 9 - TSS region transcription start site region 92012
Gm33858 9 120068788 to 120070302 1514 + antisense lncRNA gene predicted gene, 33858
Tssr87704 9 120074815 to 120074826 11 + TSS region transcription start site region 87704
Tssr92013 9 120091125 to 120091153 28 - TSS region transcription start site region 92013
Tssr87705 9 120091379 to 120091427 48 + TSS region transcription start site region 87705
Tssr92014 9 120091982 to 120092014 32 - TSS region transcription start site region 92014
Tssr87706 9 120092106 to 120092121 15 + TSS region transcription start site region 87706
Ccr8 9 120092133 to 120094906 2773 + protein coding gene chemokine (C-C motif) receptor 8
Tssr87707 9 120094926 to 120094937 11 + TSS region transcription start site region 87707
Gm47050 9 120095663 to 120097838 2175 + unclassified gene predicted gene, 47050
Cpgi22492 9 120110242 to 120110933 691 CpG island CpG island 22492
Tssr87708 9 120110349 to 120110418 69 + TSS region transcription start site region 87708
Slc25a38 9 120110399 to 120124342 13943 + protein coding gene solute carrier family 25, member 38
Tssr87709 9 120110497 to 120110508 11 + TSS region transcription start site region 87709
Tssr92015 9 120110740 to 120110772 32 - TSS region transcription start site region 92015
Tssr87710 9 120114897 to 120114956 59 + TSS region transcription start site region 87710
Tssr87711 9 120114962 to 120114978 16 + TSS region transcription start site region 87711
Tssr87712 9 120114993 to 120115008 15 + TSS region transcription start site region 87712
Tssr87713 9 120116237 to 120116246 9 + TSS region transcription start site region 87713
Tssr87714 9 120116507 to 120116526 19 + TSS region transcription start site region 87714
Tssr3053 9 120120707 to 120120714 7 + TSS region transcription start site region 3053
Cpgi22493 9 120127422 to 120128367 945 CpG island CpG island 22493
Rpsa 9 120127766 to 120132369 4603 + protein coding gene ribosomal protein SA
Tssr87715 9 120127779 to 120127793 14 + TSS region transcription start site region 87715
Gm24044 9 120128780 to 120128935 155 + snoRNA gene predicted gene, 24044
Gm26448 9 120129351 to 120129553 202 + snoRNA gene predicted gene, 26448
Snora62 9 120130434 to 120130563 129 + snoRNA gene small nucleolar RNA, H/ACA box 62