Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 9:119965406-120032150

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41 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Ttc21a 9 119937606 to 119967793 30187 + protein coding gene tetratricopeptide repeat domain 21A
Csrnp1 9 119971163 to 119984658 13495 - protein coding gene cysteine-serine-rich nuclear protein 1
Cpgi22487 9 119974119 to 119974446 327 CpG island CpG island 22487
Tssr91991 9 119976053 to 119976080 27 - TSS region transcription start site region 91991
Tssr91992 9 119977612 to 119977624 12 - TSS region transcription start site region 91992
Tssr91993 9 119978267 to 119978277 10 - TSS region transcription start site region 91993
Tssr91994 9 119978288 to 119978300 12 - TSS region transcription start site region 91994
Tssr91995 9 119980471 to 119980475 4 - TSS region transcription start site region 91995
Tssr91996 9 119981364 to 119981379 15 - TSS region transcription start site region 91996
Tssr87695 9 119981645 to 119981655 10 + TSS region transcription start site region 87695
Cpgi22488 9 119982657 to 119984445 1788 CpG island CpG island 22488
Tssr87696 9 119982732 to 119982744 12 + TSS region transcription start site region 87696
Tssr91997 9 119982860 to 119982869 9 - TSS region transcription start site region 91997
Tssr91998 9 119982981 to 119983003 22 - TSS region transcription start site region 91998
Tssr91999 9 119983005 to 119983040 35 - TSS region transcription start site region 91999
Tssr87697 9 119983124 to 119983131 7 + TSS region transcription start site region 87697
Tssr87698 9 119983133 to 119983168 35 + TSS region transcription start site region 87698
1700019L13Rik 9 119983146 to 119988092 4946 + antisense lncRNA gene RIKEN cDNA 1700019L13 gene
Tssr92000 9 119983733 to 119983748 15 - TSS region transcription start site region 92000
Tssr92001 9 119983762 to 119983780 18 - TSS region transcription start site region 92001
Tssr87699 9 119983908 to 119983974 66 + TSS region transcription start site region 87699
Tssr87700 9 119983976 to 119983987 11 + TSS region transcription start site region 87700
Cpgi22489 9 119984515 to 119984713 198 CpG island CpG island 22489
Tssr92002 9 119984624 to 119984629 5 - TSS region transcription start site region 92002
Tssr92003 9 119984664 to 119984684 20 - TSS region transcription start site region 92003
Gm33800 9 119985406 to 120012150 26744 + lncRNA gene predicted gene, 33800
Cpgi22490 9 120002119 to 120002324 205 CpG island CpG island 22490
Tssr87701 9 120002345 to 120002357 12 + TSS region transcription start site region 87701
Tssr87702 9 120002372 to 120002386 14 + TSS region transcription start site region 87702
Gm47043 9 120004037 to 120005106 1069 + lincRNA gene predicted gene, 47043
Tssr3052 9 120004842 to 120004853 11 + TSS region transcription start site region 3052
Tssr92004 9 120009184 to 120009190 6 - TSS region transcription start site region 92004
Gm49427 9 120009805 to 120011448 1643 + lincRNA gene predicted gene, 49427
Cpgi22491 9 120010924 to 120011680 756 CpG island CpG island 22491
Tssr92005 9 120011191 to 120011233 42 - TSS region transcription start site region 92005
Tssr92006 9 120012757 to 120012770 13 - TSS region transcription start site region 92006
Tssr92007 9 120012836 to 120012846 10 - TSS region transcription start site region 92007
Tssr92008 9 120012860 to 120012879 19 - TSS region transcription start site region 92008
Tssr87703 9 120013042 to 120013077 35 + TSS region transcription start site region 87703
Xirp1 9 120013755 to 120023598 9843 - protein coding gene xin actin-binding repeat containing 1
Tssr92009 9 120023558 to 120023574 16 - TSS region transcription start site region 92009