Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 9:119653759-119925456

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16 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Scn10a 9 119608456 to 119719322 110866 - protein coding gene sodium channel, voltage-gated, type X, alpha
Tssr3051 9 119691368 to 119691387 19 + TSS region transcription start site region 3051
Gm33701 9 119744216 to 119754451 10235 + lncRNA gene predicted gene, 33701
Scn11a 9 119753759 to 119825456 71697 - protein coding gene sodium channel, voltage-gated, type XI, alpha
Cpgi22481 9 119791927 to 119792119 192 CpG island CpG island 22481
Tssr87689 9 119796640 to 119796642 2 + TSS region transcription start site region 87689
Cpgi22482 9 119797556 to 119797791 235 CpG island CpG island 22482
Cpgi22483 9 119828488 to 119828763 275 CpG island CpG island 22483
Gm46134 9 119882946 to 119887573 4627 - lncRNA gene predicted gene, 46134
Gm2449 9 119887575 to 119894912 7337 - bidirectional promoter lncRNA gene predicted gene 2449
Cpgi22484 9 119894554 to 119895790 1236 CpG island CpG island 22484
Tssr87690 9 119894876 to 119894913 37 + TSS region transcription start site region 87690
Wdr48 9 119894895 to 119926586 31691 + protein coding gene WD repeat domain 48
Tssr87691 9 119895131 to 119895148 17 + TSS region transcription start site region 87691
Tssr91989 9 119895137 to 119895141 4 - TSS region transcription start site region 91989
Tssr87692 9 119895155 to 119895211 56 + TSS region transcription start site region 87692