Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 9:119521368-119861387

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16 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Scn5a 9 119483408 to 119579016 95608 - protein coding gene sodium channel, voltage-gated, type V, alpha
Tssr91985 9 119564692 to 119564705 13 - TSS region transcription start site region 91985
Tssr91986 9 119564747 to 119564756 9 - TSS region transcription start site region 91986
Cpgi22478 9 119578060 to 119579591 1531 CpG island CpG island 22478
Tssr91987 9 119578981 to 119579031 50 - TSS region transcription start site region 91987
Tssr91988 9 119579040 to 119579051 11 - TSS region transcription start site region 91988
Cpgi22479 9 119580295 to 119580468 173 CpG island CpG island 22479
Cpgi22480 9 119589019 to 119589293 274 CpG island CpG island 22480
Scn10a 9 119608456 to 119719322 110866 - protein coding gene sodium channel, voltage-gated, type X, alpha
Tssr3051 9 119691368 to 119691387 19 + TSS region transcription start site region 3051
Gm33701 9 119744216 to 119754451 10235 + lncRNA gene predicted gene, 33701
Scn11a 9 119753759 to 119825456 71697 - protein coding gene sodium channel, voltage-gated, type XI, alpha
Cpgi22481 9 119791927 to 119792119 192 CpG island CpG island 22481
Tssr87689 9 119796640 to 119796642 2 + TSS region transcription start site region 87689
Cpgi22482 9 119797556 to 119797791 235 CpG island CpG island 22482
Cpgi22483 9 119828488 to 119828763 275 CpG island CpG island 22483