Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 9:119503456-119824322

18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Scn5a	9	119483408 to 119579016	95608	-	protein coding gene	sodium channel, voltage-gated, type V, alpha
Tssr91984	9	119510805 to 119510809	4	-	TSS region	transcription start site region 91984
Cpgi22476	9	119517425 to 119517687	262		CpG island	CpG island 22476
Cpgi22477	9	119519198 to 119519436	238		CpG island	CpG island 22477
Tssr91985	9	119564692 to 119564705	13	-	TSS region	transcription start site region 91985
Tssr91986	9	119564747 to 119564756	9	-	TSS region	transcription start site region 91986
Cpgi22478	9	119578060 to 119579591	1531		CpG island	CpG island 22478
Tssr91987	9	119578981 to 119579031	50	-	TSS region	transcription start site region 91987
Tssr91988	9	119579040 to 119579051	11	-	TSS region	transcription start site region 91988
Cpgi22479	9	119580295 to 119580468	173		CpG island	CpG island 22479
Cpgi22480	9	119589019 to 119589293	274		CpG island	CpG island 22480
Scn10a	9	119608456 to 119719322	110866	-	protein coding gene	sodium channel, voltage-gated, type X, alpha
Tssr3051	9	119691368 to 119691387	19	+	TSS region	transcription start site region 3051
Gm33701	9	119744216 to 119754451	10235	+	lncRNA gene	predicted gene, 33701
Scn11a	9	119753759 to 119825456	71697	-	protein coding gene	sodium channel, voltage-gated, type XI, alpha
Cpgi22481	9	119791927 to 119792119	192		CpG island	CpG island 22481
Tssr87689	9	119796640 to 119796642	2	+	TSS region	transcription start site region 87689
Cpgi22482	9	119797556 to 119797791	235		CpG island	CpG island 22482