MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 9:116004547-116174566

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Gadl1	9	115909455 to 116076176	166721	+	protein coding gene	glutamate decarboxylase-like 1
Gm9385	9	116040593 to 116041064	471	-	pseudogene	predicted pseudogene 9385
Tssr91912	9	116041065 to 116041099	34	-	TSS region	transcription start site region 91912
4930465K12Rik	9	116047666 to 116050865	3199		unclassified gene	RIKEN cDNA 4930465K12 gene
Gm31014	9	116051726 to 116054478	2752	-	lncRNA gene	predicted gene, 31014
Cpgi22445	9	116064785 to 116065126	341		CpG island	CpG island 22445
D9Mit215	9	116072984 to 116073102	118		DNA segment	DNA segment, Chr 9, Massachusetts Institute of Technology 215
Gm18328	9	116079689 to 116080464	775	-	pseudogene	predicted gene, 18328
Cpgi22446	9	116084904 to 116085113	209		CpG island	CpG island 22446
Tgfbr2	9	116087695 to 116175363	87668	-	protein coding gene	transforming growth factor, beta receptor II
Tssr91913	9	116089547 to 116089566	19	-	TSS region	transcription start site region 91913
Tssr91914	9	116090167 to 116090178	11	-	TSS region	transcription start site region 91914
Gm31292	9	116142106 to 116151166	9060	+	lncRNA gene	predicted gene, 31292
Tssr87594	9	116145441 to 116145468	27	+	TSS region	transcription start site region 87594
D730035F11Rik	9	116161298 to 116165100	3802		unclassified gene	RIKEN cDNA D730035F11 gene
Tssr91915	9	116170395 to 116170400	5	-	TSS region	transcription start site region 91915
Tssr91916	9	116173102 to 116173106	4	-	TSS region	transcription start site region 91916
Cpgi22447	9	116174406 to 116175585	1179		CpG island	CpG island 22447