Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 9:115799455-116186176

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33 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
D9Dcr128 9 115800136 to 115800240 104 DNA segment DNA segment, Chr 9, Derry C. Roopenian 128
Tssr87593 9 115908472 to 115908497 25 + TSS region transcription start site region 87593
Gadl1 9 115909455 to 116076176 166721 + protein coding gene glutamate decarboxylase-like 1
Gm31234 9 115951107 to 115977967 26860 - lncRNA gene predicted gene, 31234
Cpgi22444 9 115954951 to 115955254 303 CpG island CpG island 22444
Gm16142 9 115990956 to 116001788 10832 - antisense lncRNA gene predicted gene 16142
Gm9385 9 116040593 to 116041064 471 - pseudogene predicted pseudogene 9385
Tssr91912 9 116041065 to 116041099 34 - TSS region transcription start site region 91912
4930465K12Rik 9 116047666 to 116050865 3199 unclassified gene RIKEN cDNA 4930465K12 gene
Gm31014 9 116051726 to 116054478 2752 - lncRNA gene predicted gene, 31014
Cpgi22445 9 116064785 to 116065126 341 CpG island CpG island 22445
D9Mit215 9 116072984 to 116073102 118 DNA segment DNA segment, Chr 9, Massachusetts Institute of Technology 215
Gm18328 9 116079689 to 116080464 775 - pseudogene predicted gene, 18328
Cpgi22446 9 116084904 to 116085113 209 CpG island CpG island 22446
Tgfbr2 9 116087695 to 116175363 87668 - protein coding gene transforming growth factor, beta receptor II
Tssr91913 9 116089547 to 116089566 19 - TSS region transcription start site region 91913
Tssr91914 9 116090167 to 116090178 11 - TSS region transcription start site region 91914
Gm31292 9 116142106 to 116151166 9060 + lncRNA gene predicted gene, 31292
Tssr87594 9 116145441 to 116145468 27 + TSS region transcription start site region 87594
D730035F11Rik 9 116161298 to 116165100 3802 unclassified gene RIKEN cDNA D730035F11 gene
Tssr91915 9 116170395 to 116170400 5 - TSS region transcription start site region 91915
Tssr91916 9 116173102 to 116173106 4 - TSS region transcription start site region 91916
Cpgi22447 9 116174406 to 116175585 1179 CpG island CpG island 22447
Tssr91917 9 116175140 to 116175153 13 - TSS region transcription start site region 91917
Tssr91918 9 116175176 to 116175185 9 - TSS region transcription start site region 91918
Tssr91919 9 116175197 to 116175261 64 - TSS region transcription start site region 91919
Tssr91920 9 116175266 to 116175305 39 - TSS region transcription start site region 91920
Tssr87595 9 116175288 to 116175297 9 + TSS region transcription start site region 87595
Tssr91921 9 116175318 to 116175329 11 - TSS region transcription start site region 91921
Tssr91922 9 116175440 to 116175451 11 - TSS region transcription start site region 91922
Gm40582 9 116175644 to 116178607 2963 + lncRNA gene predicted gene, 40582
Tssr91923 9 116175716 to 116175732 16 - TSS region transcription start site region 91923
Tssr91924 9 116175901 to 116175928 27 - TSS region transcription start site region 91924