Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 9:115392481-115672593

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21 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm40581 9 115391580 to 115394060 2480 - lncRNA gene predicted gene, 40581
D9Dcr126 9 115398712 to 115398840 128 DNA segment DNA segment, Chr 9, Derry C. Roopenian 126
D9Mit214 9 115398712 to 115398849 137 DNA segment DNA segment, Chr 9, Massachusetts Institute of Technology 214
Gm40587 9 115399907 to 115400651 744 + protein coding gene predicted gene, 40587
Gm9487 9 115405149 to 115405620 471 + pseudogene predicted gene 9487
Gm22243 9 115411234 to 115411353 119 - miRNA gene predicted gene, 22243
Gm5921 9 115437700 to 115438581 881 - pseudogene predicted gene 5921
Tssr91906 9 115438605 to 115438606 1 - TSS region transcription start site region 91906
Gm39447 9 115450495 to 115539794 89299 + lncRNA gene predicted gene, 39447
Tssr91907 9 115458292 to 115458297 5 - TSS region transcription start site region 91907
Tssr91908 9 115471686 to 115471706 20 - TSS region transcription start site region 91908
Tssr91909 9 115499641 to 115499659 18 - TSS region transcription start site region 91909
D9Mit150 9 115532481 to 115532593 112 DNA segment DNA segment, Chr 9, Massachusetts Institute of Technology 150
Cpgi22443 9 115550908 to 115551233 325 CpG island CpG island 22443
D9Mit118 9 115604940 to 115605016 76 DNA segment DNA segment, Chr 9, Massachusetts Institute of Technology 118
Tssr91910 9 115609742 to 115609746 4 - TSS region transcription start site region 91910
Tssr91911 9 115611764 to 115611775 11 - TSS region transcription start site region 91911
n-R5s92 9 115626600 to 115626718 118 - rRNA gene nuclear encoded rRNA 5S 92
Gm39448 9 115630571 to 115658857 28286 - lncRNA gene predicted gene, 39448
D9Mit117 9 115658261 to 115658485 224 DNA segment DNA segment, Chr 9, Massachusetts Institute of Technology 117
D330037F02Rik 9 115665914 to 115674353 8439 + lncRNA gene RIKEN cDNA D330037F02 gene