Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 9:115303261-116013485

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51 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Stt3b 9 115242581 to 115310421 67840 - protein coding gene STT3, subunit of the oligosaccharyltransferase complex, homolog B (S. cerevisiae)
Cpgi22442 9 115309254 to 115311128 1874 CpG island CpG island 22442
Gm9757 9 115309820 to 115312072 2252 unclassified gene predicted gene 9757
Tssr91893 9 115310057 to 115310065 8 - TSS region transcription start site region 91893
Tssr91894 9 115310072 to 115310094 22 - TSS region transcription start site region 91894
Tssr91895 9 115310100 to 115310157 57 - TSS region transcription start site region 91895
Tssr91896 9 115310165 to 115310181 16 - TSS region transcription start site region 91896
Tssr91897 9 115310239 to 115310250 11 - TSS region transcription start site region 91897
Tssr91898 9 115310285 to 115310296 11 - TSS region transcription start site region 91898
Tssr91899 9 115310400 to 115310407 7 - TSS region transcription start site region 91899
Tssr91900 9 115310425 to 115310447 22 - TSS region transcription start site region 91900
Tssr91901 9 115310459 to 115310484 25 - TSS region transcription start site region 91901
Tssr91902 9 115310511 to 115310520 9 - TSS region transcription start site region 91902
Tssr91903 9 115310538 to 115310549 11 - TSS region transcription start site region 91903
Tssr91904 9 115310564 to 115310570 6 - TSS region transcription start site region 91904
Tssr91905 9 115310864 to 115310877 13 - TSS region transcription start site region 91905
Tssr87592 9 115311166 to 115311169 3 + TSS region transcription start site region 87592
4930428G15Rik 9 115336161 to 115341924 5763 + lncRNA gene RIKEN cDNA 4930428G15 gene
Gm30762 9 115347699 to 115370698 22999 + lncRNA gene predicted gene, 30762
Mir467h 9 115381819 to 115381939 120 + miRNA gene microRNA 467h
Gm26303 9 115381960 to 115382078 118 + miRNA gene predicted gene, 26303
Gm25510 9 115382099 to 115382221 122 + miRNA gene predicted gene, 25510
Gm40581 9 115391580 to 115394060 2480 - lncRNA gene predicted gene, 40581
D9Mit214 9 115398712 to 115398849 137 DNA segment DNA segment, Chr 9, Massachusetts Institute of Technology 214
D9Dcr126 9 115398712 to 115398840 128 DNA segment DNA segment, Chr 9, Derry C. Roopenian 126
Gm40587 9 115399907 to 115400651 744 + protein coding gene predicted gene, 40587
Gm9487 9 115405149 to 115405620 471 + pseudogene predicted gene 9487
Gm22243 9 115411234 to 115411353 119 - miRNA gene predicted gene, 22243
Gm5921 9 115437700 to 115438581 881 - pseudogene predicted gene 5921
Tssr91906 9 115438605 to 115438606 1 - TSS region transcription start site region 91906
Gm39447 9 115450495 to 115539794 89299 + lncRNA gene predicted gene, 39447
Tssr91907 9 115458292 to 115458297 5 - TSS region transcription start site region 91907
Tssr91908 9 115471686 to 115471706 20 - TSS region transcription start site region 91908
Tssr91909 9 115499641 to 115499659 18 - TSS region transcription start site region 91909
D9Mit150 9 115532481 to 115532593 112 DNA segment DNA segment, Chr 9, Massachusetts Institute of Technology 150
Cpgi22443 9 115550908 to 115551233 325 CpG island CpG island 22443
D9Mit118 9 115604940 to 115605016 76 DNA segment DNA segment, Chr 9, Massachusetts Institute of Technology 118
Tssr91910 9 115609742 to 115609746 4 - TSS region transcription start site region 91910
Tssr91911 9 115611764 to 115611775 11 - TSS region transcription start site region 91911
n-R5s92 9 115626600 to 115626718 118 - rRNA gene nuclear encoded rRNA 5S 92
Gm39448 9 115630571 to 115658857 28286 - lncRNA gene predicted gene, 39448
D9Mit117 9 115658261 to 115658485 224 DNA segment DNA segment, Chr 9, Massachusetts Institute of Technology 117
D330037F02Rik 9 115665914 to 115674353 8439 + lncRNA gene RIKEN cDNA D330037F02 gene
Gm48007 9 115680743 to 115682263 1520 + lincRNA gene predicted gene, 48007
D9Dcr127 9 115718757 to 115718867 110 DNA segment DNA segment, Chr 9, Derry C. Roopenian 127
D9Dcr128 9 115800136 to 115800240 104 DNA segment DNA segment, Chr 9, Derry C. Roopenian 128
Tssr87593 9 115908472 to 115908497 25 + TSS region transcription start site region 87593
Gadl1 9 115909455 to 116076176 166721 + protein coding gene glutamate decarboxylase-like 1
Gm31234 9 115951107 to 115977967 26860 - lncRNA gene predicted gene, 31234
Cpgi22444 9 115954951 to 115955254 303 CpG island CpG island 22444
Gm16142 9 115990956 to 116001788 10832 - antisense lncRNA gene predicted gene 16142