Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 9:114973834-115203847

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23 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi22438 9 114977748 to 114979437 1689 CpG island CpG island 22438
Tssr87582 9 114978433 to 114978461 28 + TSS region transcription start site region 87582
Tssr87583 9 114978479 to 114978506 27 + TSS region transcription start site region 87583
Tssr87584 9 114978507 to 114978550 43 + TSS region transcription start site region 87584
Osbpl10 9 114978569 to 115232225 253656 + protein coding gene oxysterol binding protein-like 10
Rps27rt 9 114982366 to 114982739 373 - protein coding gene ribosomal protein S27, retrogene
Tssr91885 9 114982739 to 114982742 3 - TSS region transcription start site region 91885
Tssr91886 9 114986705 to 114986707 2 - TSS region transcription start site region 91886
Tssr87585 9 114998944 to 114998990 46 + TSS region transcription start site region 87585
Tssr91887 9 115035025 to 115035031 6 - TSS region transcription start site region 91887
Tssr87586 9 115039529 to 115039534 5 + TSS region transcription start site region 87586
Tssr87587 9 115088834 to 115088847 13 + TSS region transcription start site region 87587
D9Dcr125 9 115121857 to 115121969 112 DNA segment DNA segment, Chr 9, Derry C. Roopenian 125
Cpgi22439 9 115150422 to 115150890 468 CpG island CpG island 22439
Cpgi22440 9 115151492 to 115151657 165 CpG island CpG island 22440
Tssr87588 9 115167243 to 115167245 2 + TSS region transcription start site region 87588
Gm4665 9 115180404 to 115186058 5654 - antisense lncRNA gene predicted gene 4665
Tssr91888 9 115186038 to 115186071 33 - TSS region transcription start site region 91888
Tssr3048 9 115186199 to 115186230 31 + TSS region transcription start site region 3048
Gm26962 9 115195453 to 115196898 1445 - antisense lncRNA gene predicted gene, 26962
Tssr87589 9 115200395 to 115200438 43 + TSS region transcription start site region 87589
Gm27002 9 115200398 to 115203875 3477 + sense intronic lncRNA gene predicted gene, 27002
Tssr87590 9 115200885 to 115200889 4 + TSS region transcription start site region 87590