Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 9:114777334-115027340

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43 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cmtm7 9 114756836 to 114781856 25020 - protein coding gene CKLF-like MARVEL transmembrane domain containing 7
Tssr91866 9 114778787 to 114778808 21 - TSS region transcription start site region 91866
Tssr91867 9 114778818 to 114778832 14 - TSS region transcription start site region 91867
Tssr91868 9 114778922 to 114778926 4 - TSS region transcription start site region 91868
Tssr91869 9 114778974 to 114778989 15 - TSS region transcription start site region 91869
Tssr91870 9 114779255 to 114779261 6 - TSS region transcription start site region 91870
Gm9888 9 114780100 to 114782257 2157 + antisense lncRNA gene predicted gene 9888
Tssr87581 9 114781086 to 114781125 39 + TSS region transcription start site region 87581
Cpgi22434 9 114781174 to 114782260 1086 CpG island CpG island 22434
Tssr91871 9 114781360 to 114781381 21 - TSS region transcription start site region 91871
Tssr91872 9 114781385 to 114781408 23 - TSS region transcription start site region 91872
Tssr91873 9 114781790 to 114781799 9 - TSS region transcription start site region 91873
Tssr91874 9 114781811 to 114781887 76 - TSS region transcription start site region 91874
Tssr91875 9 114781945 to 114781956 11 - TSS region transcription start site region 91875
Tssr91876 9 114781986 to 114781998 12 - TSS region transcription start site region 91876
Cmtm8 9 114789343 to 114844152 54809 - protein coding gene CKLF-like MARVEL transmembrane domain containing 8
Tssr91877 9 114819033 to 114819042 9 - TSS region transcription start site region 91877
Tssr91878 9 114819077 to 114819086 9 - TSS region transcription start site region 91878
D9Mit55 9 114820285 to 114820396 111 DNA segment DNA segment, Chr 9, Massachusetts Institute of Technology 55
Gm23889 9 114838173 to 114838276 103 + snRNA gene predicted gene, 23889
Cpgi22435 9 114843559 to 114844760 1201 CpG island CpG island 22435
Tssr91879 9 114844090 to 114844171 81 - TSS region transcription start site region 91879
Tssr91880 9 114844728 to 114844734 6 - TSS region transcription start site region 91880
Gm30448 9 114846988 to 114853663 6675 - lncRNA gene predicted gene, 30448
Gpd1l 9 114899341 to 114933987 34646 - protein coding gene glycerol-3-phosphate dehydrogenase 1-like
Tssr91881 9 114902334 to 114902340 6 - TSS region transcription start site region 91881
D9Mit16 9 114902536 to 114902713 177 DNA segment DNA segment, Chr 9, Massachusetts Institute of Technology 16
Cpgi22436 9 114904779 to 114905031 252 CpG island CpG island 22436
D9Mit125 9 114929102 to 114929213 111 DNA segment DNA segment, Chr 9, Massachusetts Institute of Technology 125
Cpgi22437 9 114933084 to 114934205 1121 CpG island CpG island 22437
Gm10609 9 114933424 to 114935989 2565 protein coding gene predicted gene 10609
Tssr91882 9 114933586 to 114933646 60 - TSS region transcription start site region 91882
Tssr91883 9 114933811 to 114933890 79 - TSS region transcription start site region 91883
Tssr91884 9 114933929 to 114933999 70 - TSS region transcription start site region 91884
Cpgi22438 9 114977748 to 114979437 1689 CpG island CpG island 22438
Tssr87582 9 114978433 to 114978461 28 + TSS region transcription start site region 87582
Tssr87583 9 114978479 to 114978506 27 + TSS region transcription start site region 87583
Tssr87584 9 114978507 to 114978550 43 + TSS region transcription start site region 87584
Osbpl10 9 114978569 to 115232225 253656 + protein coding gene oxysterol binding protein-like 10
Rps27rt 9 114982366 to 114982739 373 - protein coding gene ribosomal protein S27, retrogene
Tssr91885 9 114982739 to 114982742 3 - TSS region transcription start site region 91885
Tssr91886 9 114986705 to 114986707 2 - TSS region transcription start site region 91886
Tssr87585 9 114998944 to 114998990 46 + TSS region transcription start site region 87585