Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 9:114477088-114727192

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51 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Ccr4 9 114490316 to 114504916 14600 - protein coding gene chemokine (C-C motif) receptor 4
Tssr91836 9 114496537 to 114496551 14 - TSS region transcription start site region 91836
Tssr91837 9 114496571 to 114496581 10 - TSS region transcription start site region 91837
Tssr91838 9 114496596 to 114496605 9 - TSS region transcription start site region 91838
Tssr91839 9 114496609 to 114496620 11 - TSS region transcription start site region 91839
Tssr91840 9 114497337 to 114497351 14 - TSS region transcription start site region 91840
Tssr91841 9 114501213 to 114501254 41 - TSS region transcription start site region 91841
Trim71 9 114511268 to 114564369 53101 - protein coding gene tripartite motif-containing 71
Tssr91842 9 114512439 to 114512443 4 - TSS region transcription start site region 91842
C130032M10Rik 9 114515697 to 114516424 727 + protein coding gene RIKEN cDNA C130032M10 gene
Tssr87567 9 114515713 to 114515750 37 + TSS region transcription start site region 87567
Tssr91843 9 114520614 to 114520620 6 - TSS region transcription start site region 91843
Cpgi22423 9 114560941 to 114561701 760 CpG island CpG island 22423
Cpgi22424 9 114562125 to 114564585 2460 CpG island CpG island 22424
Tssr91844 9 114563242 to 114563253 11 - TSS region transcription start site region 91844
Tssr91845 9 114563269 to 114563283 14 - TSS region transcription start site region 91845
Tssr91846 9 114563287 to 114563303 16 - TSS region transcription start site region 91846
Tssr91847 9 114564086 to 114564103 17 - TSS region transcription start site region 91847
Tssr91848 9 114564197 to 114564209 12 - TSS region transcription start site region 91848
Tssr91849 9 114564288 to 114564295 7 - TSS region transcription start site region 91849
Tssr91850 9 114564315 to 114564334 19 - TSS region transcription start site region 91850
Tssr91851 9 114564338 to 114564349 11 - TSS region transcription start site region 91851
Cpgi22425 9 114579399 to 114579592 193 CpG island CpG island 22425
Cpgi22426 9 114579908 to 114580217 309 CpG island CpG island 22426
Cpgi22427 9 114583828 to 114584195 367 CpG island CpG island 22427
Tssr91852 9 114584262 to 114584275 13 - TSS region transcription start site region 91852
Cnot10 9 114585878 to 114640184 54306 - protein coding gene CCR4-NOT transcription complex, subunit 10
Gm23232 9 114602088 to 114602192 104 - snRNA gene predicted gene, 23232
Cpgi22428 9 114639459 to 114640332 873 CpG island CpG island 22428
Tssr91853 9 114640027 to 114640047 20 - TSS region transcription start site region 91853
Tssr91854 9 114640052 to 114640113 61 - TSS region transcription start site region 91854
Tssr91855 9 114640124 to 114640135 11 - TSS region transcription start site region 91855
Tssr91856 9 114640155 to 114640167 12 - TSS region transcription start site region 91856
Tssr91857 9 114640175 to 114640218 43 - TSS region transcription start site region 91857
Gm7780 9 114647630 to 114648035 405 - pseudogene predicted gene 7780
Cpgi22429 9 114651019 to 114651309 290 CpG island CpG island 22429
D9Mit1000 9 114678896 to 114679119 223 DNA segment DNA segment, Chr 9, Massachusetts Institute of Technology 1000
Cpgi22430 9 114688192 to 114689693 1501 CpG island CpG island 22430
Tssr91858 9 114688633 to 114688663 30 - TSS region transcription start site region 91858
Tssr87568 9 114688729 to 114688740 11 + TSS region transcription start site region 87568
Tssr87569 9 114688744 to 114688778 34 + TSS region transcription start site region 87569
Tssr87570 9 114688782 to 114688813 31 + TSS region transcription start site region 87570
Tssr87571 9 114688814 to 114688819 5 + TSS region transcription start site region 87571
Tssr87572 9 114688820 to 114688833 13 + TSS region transcription start site region 87572
Dync1li1 9 114688831 to 114723788 34957 + protein coding gene dynein cytoplasmic 1 light intermediate chain 1
Tssr87573 9 114688836 to 114688846 10 + TSS region transcription start site region 87573
Tssr87574 9 114688851 to 114688865 14 + TSS region transcription start site region 87574
Tssr87575 9 114688866 to 114688877 11 + TSS region transcription start site region 87575
Tssr87576 9 114689879 to 114689884 5 + TSS region transcription start site region 87576
Tssr87577 9 114722310 to 114722315 5 + TSS region transcription start site region 87577
Tssr87578 9 114723505 to 114723520 15 + TSS region transcription start site region 87578