Gene symbol | Chromo- some |
Coordinates (bp, mm10) | Size (bp) | Strand | Feature Type | Gene name |
---|---|---|---|---|---|---|
Susd5 | 9 | 41379 | + | protein coding gene | sushi domain containing 5 | |
Cpgi22418 | 9 | 414 | CpG island | CpG island 22418 | ||
Tssr3046 | 9 | 4 | + | TSS region | transcription start site region 3046 | |
Gm29825 | 9 | 74552 | + | lincRNA gene | predicted gene, 29825 | |
4921528I07Rik | 9 | 79331 | - | unclassified non-coding RNA gene | RIKEN cDNA 4921528I07 gene | |
Bcl2a1c | 9 | 443 | + | protein coding gene | B cell leukemia/lymphoma 2 related protein A1c | |
4930525D18Rik | 9 | 23516 | - | lncRNA gene | RIKEN cDNA 4930525D18 gene | |
Tssr3047 | 9 | 47 | - | TSS region | transcription start site region 3047 | |
Tssr91831 | 9 | 25 | - | TSS region | transcription start site region 91831 | |
4933421H06Rik | 9 | 1734 | unclassified gene | RIKEN cDNA 4933421H06 gene | ||
Cpgi22419 | 9 | 834 | CpG island | CpG island 22419 | ||
Tssr91832 | 9 | 24 | - | TSS region | transcription start site region 91832 | |
4930520O04Rik | 9 | 8914 | + | lncRNA gene | RIKEN cDNA 4930520O04 gene | |
Tssr87556 | 9 | 8 | + | TSS region | transcription start site region 87556 | |
Crtap | 9 | 15541 | - | protein coding gene | cartilage associated protein | |
Cpgi22420 | 9 | 350 | CpG island | CpG island 22420 | ||
Cpgi22421 | 9 | 1374 | CpG island | CpG island 22421 | ||
Tssr87557 | 9 | 14 | + | TSS region | transcription start site region 87557 | |
Tssr91833 | 9 | 54 | - | TSS region | transcription start site region 91833 | |
Cpgi22422 | 9 | 1154 | CpG island | CpG island 22422 | ||
Glb1 | 9 | 73301 | + | protein coding gene | galactosidase, beta 1 | |
Tssr87558 | 9 | 41 | + | TSS region | transcription start site region 87558 | |
Tmppe | 9 | 6171 | + | protein coding gene | transmembrane protein with metallophosphoesterase domain | |
Tssr87559 | 9 | 16 | + | TSS region | transcription start site region 87559 | |
Tssr87560 | 9 | 27 | + | TSS region | transcription start site region 87560 | |
Tssr87561 | 9 | 18 | + | TSS region | transcription start site region 87561 | |
Tssr87562 | 9 | 14 | + | TSS region | transcription start site region 87562 | |
Tssr87563 | 9 | 4 | + | TSS region | transcription start site region 87563 | |
Tssr91834 | 9 | 43 | - | TSS region | transcription start site region 91834 | |
Tssr87564 | 9 | 36 | + | TSS region | transcription start site region 87564 | |
Tssr87565 | 9 | 3 | + | TSS region | transcription start site region 87565 | |
Mdq9 | 9 | 0 | QTL | mammary ductal QTL 9 | ||
Tssr87566 | 9 | 11 | + | TSS region | transcription start site region 87566 | |
Gm30254 | 9 | 10368 | - | lncRNA gene | predicted gene, 30254 | |
Tssr91835 | 9 | 14 | - | TSS region | transcription start site region 91835 | |
El7 | 9 | -38699015 | QTL | epilepsy 7 | ||
El1 | 9 | -38699015 | QTL | epilepsy 1 | ||
Ccr4 | 9 | 14600 | - | protein coding gene | chemokine (C-C motif) receptor 4 | |
Tssr91836 | 9 | 14 | - | TSS region | transcription start site region 91836 | |
Tssr91837 | 9 | 10 | - | TSS region | transcription start site region 91837 | |
Tssr91838 | 9 | 9 | - | TSS region | transcription start site region 91838 | |
Tssr91839 | 9 | 11 | - | TSS region | transcription start site region 91839 | |
Tssr91840 | 9 | 14 | - | TSS region | transcription start site region 91840 | |
Tssr91841 | 9 | 41 | - | TSS region | transcription start site region 91841 | |
Trim71 | 9 | 53101 | - | protein coding gene | tripartite motif-containing 71 | |
Tssr91842 | 9 | 4 | - | TSS region | transcription start site region 91842 | |
C130032M10Rik | 9 | 727 | + | protein coding gene | RIKEN cDNA C130032M10 gene | |
Tssr87567 | 9 | 37 | + | TSS region | transcription start site region 87567 | |
Tssr91843 | 9 | 6 | - | TSS region | transcription start site region 91843 | |
Cpgi22423 | 9 | 760 | CpG island | CpG island 22423 | ||
Cpgi22424 | 9 | 2460 | CpG island | CpG island 22424 | ||
Tssr91844 | 9 | 11 | - | TSS region | transcription start site region 91844 | |
Tssr91845 | 9 | 14 | - | TSS region | transcription start site region 91845 | |
Tssr91846 | 9 | 16 | - | TSS region | transcription start site region 91846 | |
Tssr91847 | 9 | 17 | - | TSS region | transcription start site region 91847 | |
Tssr91848 | 9 | 12 | - | TSS region | transcription start site region 91848 | |
Tssr91849 | 9 | 7 | - | TSS region | transcription start site region 91849 | |
Tssr91850 | 9 | 19 | - | TSS region | transcription start site region 91850 | |
Tssr91851 | 9 | 11 | - | TSS region | transcription start site region 91851 | |
Cpgi22425 | 9 | 193 | CpG island | CpG island 22425 | ||
Cpgi22426 | 9 | 309 | CpG island | CpG island 22426 | ||
Cpgi22427 | 9 | 367 | CpG island | CpG island 22427 | ||
Tssr91852 | 9 | 13 | - | TSS region | transcription start site region 91852 | |
Cnot10 | 9 | 54306 | - | protein coding gene | CCR4-NOT transcription complex, subunit 10 | |
Gm23232 | 9 | 104 | - | snRNA gene | predicted gene, 23232 | |
Cpgi22428 | 9 | 873 | CpG island | CpG island 22428 | ||
Tssr91853 | 9 | 20 | - | TSS region | transcription start site region 91853 | |
Tssr91854 | 9 | 61 | - | TSS region | transcription start site region 91854 | |
Tssr91855 | 9 | 11 | - | TSS region | transcription start site region 91855 | |
Tssr91856 | 9 | 12 | - | TSS region | transcription start site region 91856 | |
Tssr91857 | 9 | 43 | - | TSS region | transcription start site region 91857 | |
Gm7780 | 9 | 405 | - | pseudogene | predicted gene 7780 | |
Cpgi22429 | 9 | 290 | CpG island | CpG island 22429 | ||
D9Mit1000 | 9 | 223 | DNA segment | DNA segment, Chr 9, Massachusetts Institute of Technology 1000 | ||
Cpgi22430 | 9 | 1501 | CpG island | CpG island 22430 | ||
Tssr91858 | 9 | 30 | - | TSS region | transcription start site region 91858 | |
Tssr87568 | 9 | 11 | + | TSS region | transcription start site region 87568 | |
Tssr87569 | 9 | 34 | + | TSS region | transcription start site region 87569 | |
Tssr87570 | 9 | 31 | + | TSS region | transcription start site region 87570 | |
Tssr87571 | 9 | 5 | + | TSS region | transcription start site region 87571 | |
Tssr87572 | 9 | 13 | + | TSS region | transcription start site region 87572 | |
Dync1li1 | 9 | 34957 | + | protein coding gene | dynein cytoplasmic 1 light intermediate chain 1 | |
Tssr87573 | 9 | 10 | + | TSS region | transcription start site region 87573 | |
Tssr87574 | 9 | 14 | + | TSS region | transcription start site region 87574 | |
Tssr87575 | 9 | 11 | + | TSS region | transcription start site region 87575 | |
Tssr87576 | 9 | 5 | + | TSS region | transcription start site region 87576 | |
Tssr87577 | 9 | 5 | + | TSS region | transcription start site region 87577 | |
Tssr87578 | 9 | 15 | + | TSS region | transcription start site region 87578 | |
Cpgi22431 | 9 | 632 | CpG island | CpG island 22431 | ||
Cmtm6 | 9 | 18190 | + | protein coding gene | CKLF-like MARVEL transmembrane domain containing 6 | |
Tssr87579 | 9 | 57 | + | TSS region | transcription start site region 87579 | |
Ierepo2 | 9 | 429 | unclassified gene | immediate early response, erythropoietin 2 | ||
Cpgi22432 | 9 | 671 | CpG island | CpG island 22432 | ||
Tssr87580 | 9 | 9 | + | TSS region | transcription start site region 87580 | |
Cmtm7 | 9 | 25020 | - | protein coding gene | CKLF-like MARVEL transmembrane domain containing 7 | |
Cpgi22433 | 9 | 264 | CpG island | CpG island 22433 | ||
D9Mit81 | 9 | 166 | DNA segment | DNA segment, Chr 9, Massachusetts Institute of Technology 81 | ||
Tssr91859 | 9 | 4 | - | TSS region | transcription start site region 91859 | |
Tssr91860 | 9 | 11 | - | TSS region | transcription start site region 91860 | |
Tssr91861 | 9 | 11 | - | TSS region | transcription start site region 91861 | |
Tssr91862 | 9 | 11 | - | TSS region | transcription start site region 91862 | |
Tssr91863 | 9 | 15 | - | TSS region | transcription start site region 91863 | |
Tssr91864 | 9 | 20 | - | TSS region | transcription start site region 91864 | |
Tssr91865 | 9 | 14 | - | TSS region | transcription start site region 91865 | |
Tssr91866 | 9 | 21 | - | TSS region | transcription start site region 91866 | |
Tssr91867 | 9 | 14 | - | TSS region | transcription start site region 91867 | |
Tssr91868 | 9 | 4 | - | TSS region | transcription start site region 91868 | |
Tssr91869 | 9 | 15 | - | TSS region | transcription start site region 91869 | |
Tssr91870 | 9 | 6 | - | TSS region | transcription start site region 91870 | |
Gm9888 | 9 | 2157 | + | antisense lncRNA gene | predicted gene 9888 | |
Tssr87581 | 9 | 39 | + | TSS region | transcription start site region 87581 | |
Cpgi22434 | 9 | 1086 | CpG island | CpG island 22434 | ||
Tssr91871 | 9 | 21 | - | TSS region | transcription start site region 91871 | |
Tssr91872 | 9 | 23 | - | TSS region | transcription start site region 91872 | |
Tssr91873 | 9 | 9 | - | TSS region | transcription start site region 91873 | |
Tssr91874 | 9 | 76 | - | TSS region | transcription start site region 91874 | |
Tssr91875 | 9 | 11 | - | TSS region | transcription start site region 91875 | |
Tssr91876 | 9 | 12 | - | TSS region | transcription start site region 91876 | |
Cmtm8 | 9 | 54809 | - | protein coding gene | CKLF-like MARVEL transmembrane domain containing 8 | |
Tssr91877 | 9 | 9 | - | TSS region | transcription start site region 91877 | |
Tssr91878 | 9 | 9 | - | TSS region | transcription start site region 91878 | |
D9Mit55 | 9 | 111 | DNA segment | DNA segment, Chr 9, Massachusetts Institute of Technology 55 | ||
Gm23889 | 9 | 103 | + | snRNA gene | predicted gene, 23889 | |
Cpgi22435 | 9 | 1201 | CpG island | CpG island 22435 | ||
Tssr91879 | 9 | 81 | - | TSS region | transcription start site region 91879 | |
Tssr91880 | 9 | 6 | - | TSS region | transcription start site region 91880 | |
Gm30448 | 9 | 6675 | - | lncRNA gene | predicted gene, 30448 | |
Gpd1l | 9 | 34646 | - | protein coding gene | glycerol-3-phosphate dehydrogenase 1-like | |
Tssr91881 | 9 | 6 | - | TSS region | transcription start site region 91881 | |
D9Mit16 | 9 | 177 | DNA segment | DNA segment, Chr 9, Massachusetts Institute of Technology 16 | ||
Cpgi22436 | 9 | 252 | CpG island | CpG island 22436 | ||
D9Mit125 | 9 | 111 | DNA segment | DNA segment, Chr 9, Massachusetts Institute of Technology 125 | ||
Cpgi22437 | 9 | 1121 | CpG island | CpG island 22437 | ||
Gm10609 | 9 | 2565 | protein coding gene | predicted gene 10609 | ||
Tssr91882 | 9 | 60 | - | TSS region | transcription start site region 91882 | |
Tssr91883 | 9 | 79 | - | TSS region | transcription start site region 91883 | |
Tssr91884 | 9 | 70 | - | TSS region | transcription start site region 91884 | |
Cpgi22438 | 9 | 1689 | CpG island | CpG island 22438 | ||
Tssr87582 | 9 | 28 | + | TSS region | transcription start site region 87582 | |
Tssr87583 | 9 | 27 | + | TSS region | transcription start site region 87583 | |
Tssr87584 | 9 | 43 | + | TSS region | transcription start site region 87584 | |
Osbpl10 | 9 | 253656 | + | protein coding gene | oxysterol binding protein-like 10 | |
Rps27rt | 9 | 373 | - | protein coding gene | ribosomal protein S27, retrogene | |
Tssr91885 | 9 | 3 | - | TSS region | transcription start site region 91885 | |
Tssr91886 | 9 | 2 | - | TSS region | transcription start site region 91886 | |
Tssr87585 | 9 | 46 | + | TSS region | transcription start site region 87585 | |
Tssr91887 | 9 | 6 | - | TSS region | transcription start site region 91887 | |
Tssr87586 | 9 | 5 | + | TSS region | transcription start site region 87586 | |
Tssr87587 | 9 | 13 | + | TSS region | transcription start site region 87587 | |
D9Dcr125 | 9 | 112 | DNA segment | DNA segment, Chr 9, Derry C. Roopenian 125 | ||
Cpgi22439 | 9 | 468 | CpG island | CpG island 22439 | ||
Cpgi22440 | 9 | 165 | CpG island | CpG island 22440 | ||
Tssr87588 | 9 | 2 | + | TSS region | transcription start site region 87588 | |
Gm4665 | 9 | 5654 | - | antisense lncRNA gene | predicted gene 4665 | |
Tssr91888 | 9 | 33 | - | TSS region | transcription start site region 91888 | |
Tssr3048 | 9 | 31 | + | TSS region | transcription start site region 3048 | |
Gm26962 | 9 | 1445 | - | antisense lncRNA gene | predicted gene, 26962 | |
Tssr87589 | 9 | 43 | + | TSS region | transcription start site region 87589 | |
Gm27002 | 9 | 3477 | + | sense intronic lncRNA gene | predicted gene, 27002 | |
Tssr87590 | 9 | 4 | + | TSS region | transcription start site region 87590 | |
Tssr87591 | 9 | 27 | + | TSS region | transcription start site region 87591 | |
Cpgi22441 | 9 | 201 | CpG island | CpG island 22441 | ||
2210411A11Rik | 9 | 1032 | unclassified gene | RIKEN cDNA 2210411A11 gene | ||
Stt3b | 9 | 67840 | - | protein coding gene | STT3, subunit of the oligosaccharyltransferase complex, homolog B (S. cerevisiae) | |
Tssr91889 | 9 | 16 | - | TSS region | transcription start site region 91889 | |
Stmn1-rs1 | 9 | 461 | - | pseudogene | stathmin 1, related sequence 1 | |
Tssr91890 | 9 | 9 | - | TSS region | transcription start site region 91890 | |
Tssr91891 | 9 | 5 | - | TSS region | transcription start site region 91891 | |
Tssr91892 | 9 | 3 | - | TSS region | transcription start site region 91892 | |
Cpgi22442 | 9 | 1874 | CpG island | CpG island 22442 | ||
Gm9757 | 9 | 2252 | unclassified gene | predicted gene 9757 | ||
Tssr91893 | 9 | 8 | - | TSS region | transcription start site region 91893 | |
Tssr91894 | 9 | 22 | - | TSS region | transcription start site region 91894 | |
Tssr91895 | 9 | 57 | - | TSS region | transcription start site region 91895 | |
Tssr91896 | 9 | 16 | - | TSS region | transcription start site region 91896 | |
Tssr91897 | 9 | 11 | - | TSS region | transcription start site region 91897 | |
Tssr91898 | 9 | 11 | - | TSS region | transcription start site region 91898 | |
Tssr91899 | 9 | 7 | - | TSS region | transcription start site region 91899 | |
Tssr91900 | 9 | 22 | - | TSS region | transcription start site region 91900 | |
Tssr91901 | 9 | 25 | - | TSS region | transcription start site region 91901 | |
Tssr91902 | 9 | 9 | - | TSS region | transcription start site region 91902 | |
Tssr91903 | 9 | 11 | - | TSS region | transcription start site region 91903 | |
Tssr91904 | 9 | 6 | - | TSS region | transcription start site region 91904 | |
Tssr91905 | 9 | 13 | - | TSS region | transcription start site region 91905 | |
Tssr87592 | 9 | 3 | + | TSS region | transcription start site region 87592 | |
4930428G15Rik | 9 | 5763 | + | lncRNA gene | RIKEN cDNA 4930428G15 gene | |
Gm30762 | 9 | 22999 | + | lncRNA gene | predicted gene, 30762 | |
Mir467h | 9 | 120 | + | miRNA gene | microRNA 467h | |
Gm26303 | 9 | 118 | + | miRNA gene | predicted gene, 26303 | |
Gm25510 | 9 | 122 | + | miRNA gene | predicted gene, 25510 | |
Gm40581 | 9 | 2480 | - | lncRNA gene | predicted gene, 40581 | |
D9Dcr126 | 9 | 128 | DNA segment | DNA segment, Chr 9, Derry C. Roopenian 126 | ||
D9Mit214 | 9 | 137 | DNA segment | DNA segment, Chr 9, Massachusetts Institute of Technology 214 | ||
Gm40587 | 9 | 744 | + | protein coding gene | predicted gene, 40587 |