Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 9:113919209-114019216

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26 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Clasp2 9 113741473 to 113919682 178209 + protein coding gene CLIP associating protein 2
Tssr87538 9 113919357 to 113919361 4 + TSS region transcription start site region 87538
Gm39439 9 113920602 to 113930840 10238 - lncRNA gene predicted gene, 39439
Cpgi22412 9 113930612 to 113932076 1464 CpG island CpG island 22412
Ubp1 9 113930934 to 113977202 46268 + protein coding gene upstream binding protein 1
Tssr87539 9 113930964 to 113930987 23 + TSS region transcription start site region 87539
Tssr87540 9 113930990 to 113931066 76 + TSS region transcription start site region 87540
Tssr87541 9 113931138 to 113931188 50 + TSS region transcription start site region 87541
Tssr87542 9 113931308 to 113931317 9 + TSS region transcription start site region 87542
Tssr91829 9 113955906 to 113955929 23 - TSS region transcription start site region 91829
Tssr87543 9 113955971 to 113955983 12 + TSS region transcription start site region 87543
Tssr87544 9 113955984 to 113956011 27 + TSS region transcription start site region 87544
Tssr87545 9 113956020 to 113956027 7 + TSS region transcription start site region 87545
Tssr87546 9 113956043 to 113956048 5 + TSS region transcription start site region 87546
Tssr87547 9 113956222 to 113956233 11 + TSS region transcription start site region 87547
Tssr87548 9 113956682 to 113956687 5 + TSS region transcription start site region 87548
Fbxl2 9 113958557 to 114026787 68230 - protein coding gene F-box and leucine-rich repeat protein 2
Tssr87549 9 113958697 to 113958712 15 + TSS region transcription start site region 87549
Tssr87550 9 113969209 to 113969216 7 + TSS region transcription start site region 87550
Tssr87551 9 113969221 to 113969229 8 + TSS region transcription start site region 87551
Tssr87552 9 113969236 to 113969252 16 + TSS region transcription start site region 87552
Gm47950 9 113969984 to 113970998 1014 - antisense lncRNA gene predicted gene, 47950
Tssr87553 9 113976287 to 113976314 27 + TSS region transcription start site region 87553
Gm36035 9 114004771 to 114005261 490 - pseudogene predicted gene, 36035
Cpgi22413 9 114010054 to 114010230 176 CpG island CpG island 22413
Cpgi22414 9 114011340 to 114011504 164 CpG island CpG island 22414