Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 9:113658852-113760291

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20 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Pdcd6ip 9 113651744 to 113708259 56515 - protein coding gene programmed cell death 6 interacting protein
Tssr91822 9 113662356 to 113662386 30 - TSS region transcription start site region 91822
Tssr91823 9 113662500 to 113662520 20 - TSS region transcription start site region 91823
Tssr91824 9 113668048 to 113668070 22 - TSS region transcription start site region 91824
Tssr91825 9 113671795 to 113671816 21 - TSS region transcription start site region 91825
Cpgi22410 9 113707655 to 113708528 873 CpG island CpG island 22410
Tssr91826 9 113707677 to 113707701 24 - TSS region transcription start site region 91826
Tssr91827 9 113708181 to 113708197 16 - TSS region transcription start site region 91827
Tssr91828 9 113708209 to 113708258 49 - TSS region transcription start site region 91828
4933411B09Rik 9 113708852 to 113710291 1439 unclassified gene RIKEN cDNA 4933411B09 gene
Gm38623 9 113719250 to 113741054 21804 + lncRNA gene predicted gene, 38623
Tssr87524 9 113726414 to 113726420 6 + TSS region transcription start site region 87524
Cpgi22411 9 113740983 to 113742605 1622 CpG island CpG island 22411
Tssr87525 9 113741439 to 113741483 44 + TSS region transcription start site region 87525
Clasp2 9 113741473 to 113919682 178209 + protein coding gene CLIP associating protein 2
Tssr3044 9 113741519 to 113741524 5 + TSS region transcription start site region 3044
Tssr87526 9 113756340 to 113756353 13 + TSS region transcription start site region 87526
Tssr87527 9 113756391 to 113756447 56 + TSS region transcription start site region 87527
Tssr87528 9 113756724 to 113756751 27 + TSS region transcription start site region 87528
Tssr87529 9 113756825 to 113756844 19 + TSS region transcription start site region 87529