Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 9:111680290-112090293

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13 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Stac 9 111561437 to 111690348 128911 - protein coding gene src homology three (SH3) and cysteine rich domain
Cpgi22408 9 111689782 to 111690692 910 CpG island CpG island 22408
Tssr91718 9 111690214 to 111690240 26 - TSS region transcription start site region 91718
Tssr91719 9 111690313 to 111690344 31 - TSS region transcription start site region 91719
D9Dcr122 9 111779474 to 111779569 95 DNA segment DNA segment, Chr 9, Derry C. Roopenian 122
Tssr87514 9 111885290 to 111885293 3 + TSS region transcription start site region 87514
4930545L08Rik 9 111912311 to 111918666 6355 - lincRNA gene RIKEN cDNA 4930545L08 gene
Gm39430 9 111975467 to 111978001 2534 - lncRNA gene predicted gene, 39430
Tssr91720 9 111977877 to 111977904 27 - TSS region transcription start site region 91720
Arpp21 9 112065091 to 112235938 170847 - protein coding gene cyclic AMP-regulated phosphoprotein, 21
Tssr91721 9 112073868 to 112073879 11 - TSS region transcription start site region 91721
Tssr91722 9 112077912 to 112077952 40 - TSS region transcription start site region 91722
Tssr91723 9 112087747 to 112087765 18 - TSS region transcription start site region 91723