Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 9:111433661-111634508

18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Cpgi22404	9	111438479 to 111438663	184		CpG island	CpG island 22404
Cpgi22405	9	111438788 to 111439605	817		CpG island	CpG island 22405
Tssr87511	9	111439063 to 111439097	34	+	TSS region	transcription start site region 87511
Dclk3	9	111439081 to 111489118	50037	+	protein coding gene	doublecortin-like kinase 3
Tssr87512	9	111439098 to 111439133	35	+	TSS region	transcription start site region 87512
Tssr91716	9	111461629 to 111461633	4	-	TSS region	transcription start site region 91716
Cpgi22406	9	111467575 to 111467872	297		CpG island	CpG island 22406
Opl3m2	9	111520458 to 111520458	0		QTL	open field locomotion in the first three minutes 2
Tssr91717	9	111523219 to 111523242	23	-	TSS region	transcription start site region 91717
Gm6167	9	111533661 to 111534508	847	-	pseudogene	predicted gene 6167
Gm42523	9	111544004 to 111548940	4936	-	lincRNA gene	predicted gene 42523
D9Mit309	9	111549316 to 111549489	173		DNA segment	DNA Segment, Chr 9, Massachusetts Institute of Technology 309
Cpgi22407	9	111550584 to 111550877	293		CpG island	CpG island 22407
Gm43236	9	111561423 to 111562036	613	+	antisense lncRNA gene	predicted gene 43236
Stac	9	111561437 to 111690348	128911	-	protein coding gene	src homology three (SH3) and cysteine rich domain
Gm36088	9	111572570 to 111579389	6819	+	lncRNA gene	predicted gene, 36088
Gm36034	9	111595310 to 111599628	4318	+	lncRNA gene	predicted gene, 36034
n-R5s90	9	111613898 to 111614015	117	-	rRNA gene	nuclear encoded rRNA 5S 90