Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 9:110846088-111046112

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97 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
cir 9 108641085 to 111021636 2380551 heritable phenotypic marker circling
Prss46 9 110844506 to 110856522 12016 + protein coding gene protease, serine 46
Tssr87421 9 110849467 to 110849470 3 + TSS region transcription start site region 87421
Tssr87422 9 110849494 to 110849504 10 + TSS region transcription start site region 87422
Tssr87423 9 110849507 to 110849529 22 + TSS region transcription start site region 87423
Tssr87424 9 110849539 to 110849554 15 + TSS region transcription start site region 87424
Cpgi22394 9 110857617 to 110858431 814 CpG island CpG island 22394
Tssr87425 9 110857928 to 110857938 10 + TSS region transcription start site region 87425
Tssr87426 9 110857958 to 110857987 29 + TSS region transcription start site region 87426
Prss50 9 110857967 to 110864629 6662 + protein coding gene protease, serine 50
Tmie 9 110865707 to 110880083 14376 - protein coding gene transmembrane inner ear
Cpgi22395 9 110873573 to 110874172 599 CpG island CpG island 22395
Tssr91657 9 110873990 to 110874009 19 - TSS region transcription start site region 91657
Tssr91658 9 110874018 to 110874029 11 - TSS region transcription start site region 91658
Tssr91659 9 110874099 to 110874124 25 - TSS region transcription start site region 91659
Tssr91660 9 110878898 to 110878902 4 - TSS region transcription start site region 91660
Tssr91661 9 110879446 to 110879476 30 - TSS region transcription start site region 91661
Tssr91662 9 110879511 to 110879524 13 - TSS region transcription start site region 91662
Cpgi22396 9 110879621 to 110880917 1296 CpG island CpG island 22396
Tssr91663 9 110880052 to 110880087 35 - TSS region transcription start site region 91663
Tssr3036 9 110880107 to 110880119 12 - TSS region transcription start site region 3036
Als2cl 9 110880135 to 110900530 20395 + protein coding gene ALS2 C-terminal like
Tssr87427 9 110880157 to 110880187 30 + TSS region transcription start site region 87427
Tssr87428 9 110880192 to 110880207 15 + TSS region transcription start site region 87428
Tssr87429 9 110880249 to 110880264 15 + TSS region transcription start site region 87429
Tssr87430 9 110880286 to 110880315 29 + TSS region transcription start site region 87430
Tssr87431 9 110880321 to 110880346 25 + TSS region transcription start site region 87431
Tssr87432 9 110880350 to 110880364 14 + TSS region transcription start site region 87432
Tssr87433 9 110880401 to 110880410 9 + TSS region transcription start site region 87433
Tssr91664 9 110887955 to 110887989 34 - TSS region transcription start site region 91664
Gm43127 9 110893111 to 110895899 2788 - unclassified gene predicted gene 43127
Tssr87434 9 110895741 to 110895750 9 + TSS region transcription start site region 87434
Tssr87435 9 110895770 to 110895781 11 + TSS region transcription start site region 87435
Tssr87436 9 110896948 to 110896979 31 + TSS region transcription start site region 87436
Tssr87437 9 110907736 to 110907740 4 + TSS region transcription start site region 87437
Tssr91665 9 110909664 to 110909692 28 - TSS region transcription start site region 91665
Fam240a 9 110914739 to 110916861 2122 - protein coding gene family with sequence similarity 240 member A
Tssr91666 9 110916891 to 110916900 9 - TSS region transcription start site region 91666
Tssr91667 9 110920834 to 110920844 10 - TSS region transcription start site region 91667
Gm24269 9 110925403 to 110925479 76 + miRNA gene predicted gene, 24269
Tdgf1 9 110939608 to 110946158 6550 - protein coding gene teratocarcinoma-derived growth factor 1
Tssr91668 9 110946088 to 110946112 24 - TSS region transcription start site region 91668
Cpgi22397 9 110946522 to 110946740 218 CpG island CpG island 22397
Tssr91669 9 110947258 to 110947275 17 - TSS region transcription start site region 91669
Tssr87438 9 110948321 to 110948341 20 + TSS region transcription start site region 87438
Lrrc2 9 110951545 to 110984066 32521 + protein coding gene leucine rich repeat containing 2
Tssr87439 9 110951727 to 110951745 18 + TSS region transcription start site region 87439
Tssr87440 9 110953153 to 110953176 23 + TSS region transcription start site region 87440
Tssr87441 9 110953437 to 110953439 2 + TSS region transcription start site region 87441
Tssr87442 9 110953693 to 110953702 9 + TSS region transcription start site region 87442
Cpgi22398 9 110953694 to 110954489 795 CpG island CpG island 22398
Tssr87443 9 110953726 to 110953756 30 + TSS region transcription start site region 87443
Tssr87444 9 110953758 to 110953787 29 + TSS region transcription start site region 87444
Tssr87445 9 110953789 to 110953807 18 + TSS region transcription start site region 87445
Tssr87446 9 110953808 to 110953863 55 + TSS region transcription start site region 87446
Tssr87447 9 110960452 to 110960477 25 + TSS region transcription start site region 87447
Tssr87448 9 110960826 to 110960838 12 + TSS region transcription start site region 87448
Tssr87449 9 110960843 to 110960874 31 + TSS region transcription start site region 87449
Tssr87450 9 110960889 to 110960896 7 + TSS region transcription start site region 87450
Tssr87451 9 110960927 to 110960941 14 + TSS region transcription start site region 87451
Tssr87452 9 110965256 to 110965278 22 + TSS region transcription start site region 87452
Gm43535 9 110974432 to 110974595 163 + unclassified gene predicted gene 43535
Rtp3 9 110984938 to 110990583 5645 - protein coding gene receptor transporter protein 3
1700061E17Rik 9 110986201 to 110987804 1603 + antisense lncRNA gene RIKEN cDNA 1700061E17 gene
Gm10030 9 110989499 to 111008029 18530 + unclassified non-coding RNA gene predicted gene 10030
Tssr91670 9 110989712 to 110989728 16 - TSS region transcription start site region 91670
Tssr91671 9 110989735 to 110989748 13 - TSS region transcription start site region 91671
Tssr91672 9 110990330 to 110990344 14 - TSS region transcription start site region 91672
Tssr91673 9 110990451 to 110990466 15 - TSS region transcription start site region 91673
Tssr91674 9 110990570 to 110990599 29 - TSS region transcription start site region 91674
Tssr87453 9 110992772 to 110992794 22 + TSS region transcription start site region 87453
Tssr87454 9 110992815 to 110992820 5 + TSS region transcription start site region 87454
Tssr91675 9 111001891 to 111001897 6 - TSS region transcription start site region 91675
Tssr87455 9 111009121 to 111009129 8 + TSS region transcription start site region 87455
Tssr91676 9 111017160 to 111017167 7 - TSS region transcription start site region 91676
Tssr87456 9 111019284 to 111019298 14 + TSS region transcription start site region 87456
Ltf 9 111019292 to 111042766 23474 + protein coding gene lactotransferrin
Tssr87457 9 111020943 to 111020960 17 + TSS region transcription start site region 87457
D9Mit38 9 111021446 to 111021636 190 DNA segment DNA segment, Chr 9, Massachusetts Institute of Technology 38
Tssr87458 9 111021972 to 111021991 19 + TSS region transcription start site region 87458
Tssr87459 9 111022390 to 111022401 11 + TSS region transcription start site region 87459
Tssr3037 9 111023549 to 111023592 43 + TSS region transcription start site region 3037
Tssr87460 9 111024382 to 111024392 10 + TSS region transcription start site region 87460
Tssr3038 9 111024467 to 111024486 19 + TSS region transcription start site region 3038
Tssr87461 9 111025035 to 111025048 13 + TSS region transcription start site region 87461
Tssr87462 9 111025120 to 111025131 11 + TSS region transcription start site region 87462
Tssr3039 9 111026060 to 111026082 22 - TSS region transcription start site region 3039
Tssr87463 9 111027330 to 111027339 9 + TSS region transcription start site region 87463
Tssr87464 9 111027358 to 111027372 14 + TSS region transcription start site region 87464
Tssr87465 9 111029594 to 111029604 10 + TSS region transcription start site region 87465
Tssr91677 9 111031095 to 111031104 9 - TSS region transcription start site region 91677
Tssr87466 9 111032982 to 111032991 9 + TSS region transcription start site region 87466
Tssr87467 9 111035737 to 111035750 13 + TSS region transcription start site region 87467
Tssr87468 9 111038729 to 111038736 7 + TSS region transcription start site region 87468
Tssr87469 9 111038742 to 111038750 8 + TSS region transcription start site region 87469
Tssr87470 9 111038889 to 111038901 12 + TSS region transcription start site region 87470
Tssr91678 9 111042310 to 111042323 13 - TSS region transcription start site region 91678