Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 9:110654984-110765028

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35 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm42470 9 110655679 to 110656455 776 + lincRNA gene predicted gene 42470
Cpgi22386 9 110656327 to 110656947 620 CpG island CpG island 22386
Tssr91646 9 110656382 to 110656419 37 - TSS region transcription start site region 91646
Tssr87398 9 110656466 to 110656477 11 + TSS region transcription start site region 87398
Tssr87399 9 110656494 to 110656544 50 + TSS region transcription start site region 87399
Ccdc12 9 110656503 to 110711593 55090 + protein coding gene coiled-coil domain containing 12
Tssr87400 9 110661689 to 110661694 5 + TSS region transcription start site region 87400
Tssr87401 9 110663690 to 110663694 4 + TSS region transcription start site region 87401
Tssr87402 9 110665433 to 110665442 9 + TSS region transcription start site region 87402
Gm35715 9 110669329 to 110674954 5625 - antisense lncRNA gene predicted gene, 35715
Tssr3034 9 110680218 to 110680219 1 - TSS region transcription start site region 3034
Tssr91647 9 110684128 to 110684140 12 - TSS region transcription start site region 91647
Tssr87403 9 110689442 to 110689463 21 + TSS region transcription start site region 87403
Tssr87404 9 110709984 to 110710028 44 + TSS region transcription start site region 87404
Pth1r 9 110722085 to 110747145 25060 - protein coding gene parathyroid hormone 1 receptor
Cpgi22387 9 110726741 to 110727457 716 CpG island CpG island 22387
Tssr91648 9 110728339 to 110728343 4 - TSS region transcription start site region 91648
Cpgi22388 9 110732634 to 110733282 648 CpG island CpG island 22388
Gm35775 9 110738525 to 110741802 3277 - lncRNA gene predicted gene, 35775
Cpgi22389 9 110741918 to 110744233 2315 CpG island CpG island 22389
Tssr91649 9 110742565 to 110742576 11 - TSS region transcription start site region 91649
Tssr91650 9 110742577 to 110742591 14 - TSS region transcription start site region 91650
Tssr91651 9 110743639 to 110743646 7 - TSS region transcription start site region 91651
Tssr91652 9 110743653 to 110743673 20 - TSS region transcription start site region 91652
Tssr91653 9 110747075 to 110747121 46 - TSS region transcription start site region 91653
Tssr91654 9 110747125 to 110747132 7 - TSS region transcription start site region 91654
Tssr91655 9 110747179 to 110747191 12 - TSS region transcription start site region 91655
Tssr91656 9 110750101 to 110750120 19 - TSS region transcription start site region 91656
D9Mit37b 9 110762590 to 110762727 137 DNA segment DNA segment, Chr 9, Massachusetts Institute of Technology 37b
D9Mit37a 9 110762590 to 110762646 56 DNA segment DNA segment, Chr 9, Massachusetts Institute of Technology 37a
Bdln5 9 110762590 to 110762646 56 QTL body length 5
Bwq6 9 110762590 to 110762646 56 QTL body weight, QTL 6
Tssr87405 9 110763670 to 110763702 32 + TSS region transcription start site region 87405
Myl3 9 110763681 to 110769794 6113 + protein coding gene myosin, light polypeptide 3
Tssr3035 9 110763728 to 110763735 7 + TSS region transcription start site region 3035