Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 9:109102886-109559659

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26 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Plxnb1 9 109095389 to 109119917 24528 + protein coding gene plexin B1
Tssr87234 9 109103544 to 109103583 39 + TSS region transcription start site region 87234
Tssr87235 9 109105284 to 109105327 43 + TSS region transcription start site region 87235
Gm39423 9 109122637 to 109125907 3270 + lncRNA gene predicted gene, 39423
Fbxw21 9 109139454 to 109162022 22568 - protein coding gene F-box and WD-40 domain protein 21
Fbxw13 9 109179227 to 109195975 16748 - protein coding gene F-box and WD-40 domain protein 13
Fbxw20 9 109217432 to 109234754 17322 - protein coding gene F-box and WD-40 domain protein 20
Tcq13 9 109260000 to 59990000 -49270000 QTL total cholesterol QTL 13
Fbxw14 9 109270975 to 109287729 16754 - protein coding gene F-box and WD-40 domain protein 14
Gm22821 9 109295542 to 109295648 106 - snRNA gene predicted gene, 22821
Fbxw28 9 109322886 to 109339659 16773 - protein coding gene F-box and WD-40 domain protein 28
Gm25484 9 109347524 to 109347630 106 - snRNA gene predicted gene, 25484
Gm24641 9 109358229 to 109358335 106 - snRNA gene predicted gene, 24641
Fbxw22 9 109378400 to 109404294 25894 - protein coding gene F-box and WD-40 domain protein 22
Fbxw16 9 109432318 to 109449140 16822 - protein coding gene F-box and WD-40 domain protein 16
Gm42494 9 109440128 to 109443178 3050 + unclassified gene predicted gene 42494
Gm42493 9 109448645 to 109460105 11460 + antisense lncRNA gene predicted gene 42493
Fbxw19 9 109478507 to 109495863 17356 - protein coding gene F-box and WD-40 domain protein 19
D9Dcr114 9 109510111 to 109510208 97 DNA segment DNA segment, Chr 9, Derry C. Roopenian 114
Fbxw23 9 109516388 to 109534858 18470 - protein coding gene F-box and WD-40 domain protein 23
Tssr87236 9 109537046 to 109537081 35 + TSS region transcription start site region 87236
Gm42756 9 109537100 to 109552780 15680 + antisense lncRNA gene predicted gene 42756
Gm43089 9 109541701 to 109542913 1212 - pseudogene predicted gene 43089
Tssr91585 9 109543073 to 109543076 3 - TSS region transcription start site region 91585
Fbxw15 9 109552602 to 109568262 15660 - protein coding gene F-box and WD-40 domain protein 15
D9Mit277 9 109558488 to 109558657 169 DNA segment DNA segment, Chr 9, Massachusetts Institute of Technology 277