Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 9:109059506-109129515

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31 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Trex1 9 109057932 to 109059723 1791 - protein coding gene three prime repair exonuclease 1
Tssr91578 9 109059676 to 109059706 30 - TSS region transcription start site region 91578
Tssr91579 9 109059711 to 109059771 60 - TSS region transcription start site region 91579
Atrip 9 109059747 to 109074530 14783 - protein coding gene ATR interacting protein
Tssr91580 9 109071714 to 109071718 4 - TSS region transcription start site region 91580
Cpgi22363 9 109073674 to 109074460 786 CpG island CpG island 22363
Tssr91581 9 109074049 to 109074140 91 - TSS region transcription start site region 91581
Tma7 9 109077988 to 109082381 4393 - protein coding gene translational machinery associated 7
Cpgi22364 9 109082080 to 109082722 642 CpG island CpG island 22364
Tssr91582 9 109082372 to 109082414 42 - TSS region transcription start site region 91582
Tssr87223 9 109082485 to 109082535 50 + TSS region transcription start site region 87223
Ccdc51 9 109082493 to 109092489 9996 + protein coding gene coiled-coil domain containing 51
Gm7628 9 109093844 to 109097796 3952 - antisense lncRNA gene predicted gene 7628
Tssr3014 9 109094385 to 109094404 19 + TSS region transcription start site region 3014
Tssr87224 9 109094506 to 109094515 9 + TSS region transcription start site region 87224
Cpgi22365 9 109094537 to 109096202 1665 CpG island CpG island 22365
Tssr87225 9 109094835 to 109094850 15 + TSS region transcription start site region 87225
Tssr87226 9 109095250 to 109095271 21 + TSS region transcription start site region 87226
Plxnb1 9 109095389 to 109119917 24528 + protein coding gene plexin B1
Tssr87227 9 109095398 to 109095411 13 + TSS region transcription start site region 87227
Tssr87228 9 109095427 to 109095453 26 + TSS region transcription start site region 87228
Tssr87229 9 109095535 to 109095547 12 + TSS region transcription start site region 87229
Tssr87230 9 109095568 to 109095600 32 + TSS region transcription start site region 87230
Tssr87231 9 109095604 to 109095609 5 + TSS region transcription start site region 87231
Tssr91583 9 109095775 to 109095804 29 - TSS region transcription start site region 91583
Tssr91584 9 109095813 to 109095826 13 - TSS region transcription start site region 91584
Tssr87232 9 109096659 to 109096662 3 + TSS region transcription start site region 87232
Tssr87233 9 109102789 to 109102802 13 + TSS region transcription start site region 87233
Tssr87234 9 109103544 to 109103583 39 + TSS region transcription start site region 87234
Tssr87235 9 109105284 to 109105327 43 + TSS region transcription start site region 87235
Gm39423 9 109122637 to 109125907 3270 + lncRNA gene predicted gene, 39423