Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000


Click here to work with the entire chromosomal region 9:108642290-108742312

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38 genes found.
Gene symbol Chromo-
some
Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Arih2 9 108602942 to 108649386 46444 - protein coding gene ariadne RBR E3 ubiquitin protein ligase 2
Tssr3012 9 108648313 to 108648334 21 + TSS region transcription start site region 3012
Cpgi22349 9 108648459 to 108649645 1186 CpG island CpG island 22349
Tssr91546 9 108648615 to 108648624 9 - TSS region transcription start site region 91546
Tssr87146 9 108648720 to 108648733 13 + TSS region transcription start site region 87146
Arih2os 9 108648729 to 108650953 2224 + lncRNA gene ariadne RBR E3 ubiquitin protein ligase 2, opposite strand
Tssr91547 9 108648763 to 108648771 8 - TSS region transcription start site region 91547
Tssr91548 9 108649061 to 108649073 12 - TSS region transcription start site region 91548
Tssr91549 9 108649291 to 108649306 15 - TSS region transcription start site region 91549
Tssr91550 9 108649309 to 108649323 14 - TSS region transcription start site region 91550
Tssr91551 9 108649349 to 108649407 58 - TSS region transcription start site region 91551
Tssr87147 9 108649434 to 108649502 68 + TSS region transcription start site region 87147
Tssr91552 9 108649564 to 108649569 5 - TSS region transcription start site region 91552
Tssr91553 9 108649600 to 108649609 9 - TSS region transcription start site region 91553
Tssr91554 9 108649660 to 108649671 11 - TSS region transcription start site region 91554
Tssr87148 9 108649814 to 108649818 4 + TSS region transcription start site region 87148
Tssr87149 9 108650113 to 108650120 7 + TSS region transcription start site region 87149
Tssr87150 9 108650134 to 108650145 11 + TSS region transcription start site region 87150
2410049M19Rik 9 108652986 to 108654724 1738 - lncRNA gene RIKEN cDNA 2410049M19 gene
Gm26298 9 108653608 to 108653728 120 - miRNA gene predicted gene, 26298
Tssr91555 9 108654699 to 108654736 37 - TSS region transcription start site region 91555
Tssr91556 9 108655867 to 108655872 5 - TSS region transcription start site region 91556
Cpgi22350 9 108662021 to 108662372 351 CpG island CpG island 22350
Tssr87151 9 108662084 to 108662093 9 + TSS region transcription start site region 87151
Tssr87152 9 108662099 to 108662219 120 + TSS region transcription start site region 87152
Slc25a20 9 108662136 to 108684642 22506 + protein coding gene solute carrier family 25 (mitochondrial carnitine/acylcarnitine translocase), member 20
Tssr87153 9 108682412 to 108682420 8 + TSS region transcription start site region 87153
Tammq7 9 108683173 to 108683173 0 QTL tibialis anterior muscle mass QTL 7
Gmmq7 9 108683173 to 108683173 0 QTL gastrocnemius muscle mass QTL 7
Edlmmq9 9 108683173 to 108683173 0 QTL extensor digitorum longus muscle mass QTL 9
Tssr87154 9 108689335 to 108689353 18 + TSS region transcription start site region 87154
Cpgi22351 9 108691683 to 108693140 1457 CpG island CpG island 22351
Tssr87155 9 108692116 to 108692193 77 + TSS region transcription start site region 87155
Prkar2a 9 108692143 to 108750444 58301 + protein coding gene protein kinase, cAMP dependent regulatory, type II alpha
Tssr87156 9 108692202 to 108692212 10 + TSS region transcription start site region 87156
Tssr87157 9 108692290 to 108692312 22 + TSS region transcription start site region 87157
Gm24259 9 108738752 to 108738858 106 - snRNA gene predicted gene, 24259
Tssr87158 9 108739706 to 108739710 4 + TSS region transcription start site region 87158