MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 9:108568862-108607667

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
4833445I07Rik	9	108567533 to 108569174	1641	+	lincRNA gene	RIKEN cDNA 4833445I07 gene
Cpgi22345	9	108568701 to 108568885	184		CpG island	CpG island 22345
Cpgi22346	9	108569744 to 108570986	1242		CpG island	CpG island 22346
Tssr87144	9	108569885 to 108569943	58	+	TSS region	transcription start site region 87144
Dalrd3	9	108569886 to 108572774	2888	+	protein coding gene	DALR anticodon binding domain containing 3
Tssr87145	9	108569951 to 108569960	9	+	TSS region	transcription start site region 87145
Wdr6	9	108572313 to 108578670	6357	-	protein coding gene	WD repeat domain 6
Cpgi22347	9	108578190 to 108579297	1107		CpG island	CpG island 22347
Tssr91540	9	108578594 to 108578656	62	-	TSS region	transcription start site region 91540
Tssr91541	9	108578657 to 108578675	18	-	TSS region	transcription start site region 91541
Tssr91542	9	108578677 to 108578691	14	-	TSS region	transcription start site region 91542
Tssr91543	9	108578701 to 108578721	20	-	TSS region	transcription start site region 91543
P4htm	9	108578862 to 108597667	18805	-	protein coding gene	prolyl 4-hydroxylase, transmembrane (endoplasmic reticulum)
Gm38163	9	108584756 to 108585361	605	-	sense intronic lncRNA gene	predicted gene, 38163
Gm49209	9	108587052 to 108589545	2493	+	pseudogene	predicted gene, 49209
Cpgi22348	9	108596915 to 108597860	945		CpG island	CpG island 22348
Tssr91544	9	108597558 to 108597604	46	-	TSS region	transcription start site region 91544
Arih2	9	108602942 to 108649386	46444	-	protein coding gene	ariadne RBR E3 ubiquitin protein ligase 2