Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 9:108567052-108609545

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31 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Ndufaf3 9 108565865 to 108567342 1477 - protein coding gene NADH:ubiquinone oxidoreductase complex assembly factor 3
Cpgi22344 9 108566445 to 108568176 1731 CpG island CpG island 22344
Tssr91535 9 108567277 to 108567302 25 - TSS region transcription start site region 91535
Tssr91536 9 108567314 to 108567333 19 - TSS region transcription start site region 91536
Tssr91537 9 108567336 to 108567359 23 - TSS region transcription start site region 91537
Tssr91538 9 108567362 to 108567449 87 - TSS region transcription start site region 91538
Tssr87141 9 108567484 to 108567497 13 + TSS region transcription start site region 87141
Tssr87142 9 108567526 to 108567540 14 + TSS region transcription start site region 87142
4833445I07Rik 9 108567533 to 108569174 1641 + lincRNA gene RIKEN cDNA 4833445I07 gene
Tssr91539 9 108567580 to 108567595 15 - TSS region transcription start site region 91539
Tssr87143 9 108568018 to 108568059 41 + TSS region transcription start site region 87143
Gm24083 9 108568295 to 108568414 119 - miRNA gene predicted gene, 24083
Mir191 9 108568319 to 108568392 73 + miRNA gene microRNA 191
Cpgi22345 9 108568701 to 108568885 184 CpG island CpG island 22345
Mir425 9 108568777 to 108568861 84 + miRNA gene microRNA 425
Cpgi22346 9 108569744 to 108570986 1242 CpG island CpG island 22346
Tssr87144 9 108569885 to 108569943 58 + TSS region transcription start site region 87144
Dalrd3 9 108569886 to 108572774 2888 + protein coding gene DALR anticodon binding domain containing 3
Tssr87145 9 108569951 to 108569960 9 + TSS region transcription start site region 87145
Wdr6 9 108572313 to 108578670 6357 - protein coding gene WD repeat domain 6
Cpgi22347 9 108578190 to 108579297 1107 CpG island CpG island 22347
Tssr91540 9 108578594 to 108578656 62 - TSS region transcription start site region 91540
Tssr91541 9 108578657 to 108578675 18 - TSS region transcription start site region 91541
Tssr91542 9 108578677 to 108578691 14 - TSS region transcription start site region 91542
Tssr91543 9 108578701 to 108578721 20 - TSS region transcription start site region 91543
P4htm 9 108578862 to 108597667 18805 - protein coding gene prolyl 4-hydroxylase, transmembrane (endoplasmic reticulum)
Gm38163 9 108584756 to 108585361 605 - sense intronic lncRNA gene predicted gene, 38163
Gm49209 9 108587052 to 108589545 2493 + pseudogene predicted gene, 49209
Cpgi22348 9 108596915 to 108597860 945 CpG island CpG island 22348
Tssr91544 9 108597558 to 108597604 46 - TSS region transcription start site region 91544
Arih2 9 108602942 to 108649386 46444 - protein coding gene ariadne RBR E3 ubiquitin protein ligase 2