Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000


Click here to work with the entire chromosomal region 9:107999254-108099339

Filter by:
46 genes found.
Gene symbol Chromo-
some
Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cdhr4 9 107992497 to 107999684 7187 + protein coding gene cadherin-related family member 4
Gm20662 9 107996349 to 108045270 48921 + protein coding gene predicted gene 20662
4930535L15Rik 9 107998116 to 108002404 4288 - lncRNA gene RIKEN cDNA 4930535L15 gene
D9Dcr104 9 108000878 to 108000980 102 DNA segment DNA segment, Chr 9, Derry C. Roopenian 104
Cpgi22318 9 108002024 to 108003368 1344 CpG island CpG island 22318
Tssr87055 9 108002058 to 108002065 7 + TSS region transcription start site region 87055
Tssr91481 9 108002384 to 108002437 53 - TSS region transcription start site region 91481
Tssr87056 9 108002615 to 108002680 65 + TSS region transcription start site region 87056
Ip6k1 9 108002648 to 108048782 46134 + protein coding gene inositol hexaphosphate kinase 1
Gm38134 9 108010976 to 108016608 5632 - lncRNA gene predicted gene, 38134
Tssr87057 9 108023926 to 108023952 26 + TSS region transcription start site region 87057
Tssr87058 9 108045389 to 108045402 13 + TSS region transcription start site region 87058
Cpgi22319 9 108048595 to 108049784 1189 CpG island CpG island 22319
Gmppb 9 108049239 to 108051923 2684 + protein coding gene GDP-mannose pyrophosphorylase B
Tssr87059 9 108049254 to 108049339 85 + TSS region transcription start site region 87059
Tssr87060 9 108049859 to 108049894 35 + TSS region transcription start site region 87060
Rnf123 9 108051672 to 108080352 28680 - protein coding gene ring finger protein 123
Gm20529 9 108051675 to 108058592 6917 + lncRNA gene predicted gene 20529
Tssr87061 9 108053154 to 108053165 11 + TSS region transcription start site region 87061
Amigo3 9 108053159 to 108055701 2542 + protein coding gene adhesion molecule with Ig like domain 3
Tssr91482 9 108057293 to 108057308 15 - TSS region transcription start site region 91482
D9Dcr105 9 108059509 to 108059604 95 DNA segment DNA segment, Chr 9, Derry C. Roopenian 105
Tssr91483 9 108061988 to 108062007 19 - TSS region transcription start site region 91483
Tssr91484 9 108072062 to 108072066 4 - TSS region transcription start site region 91484
D9Dcr106 9 108078300 to 108078401 101 DNA segment DNA segment, Chr 9, Derry C. Roopenian 106
Cpgi22320 9 108078764 to 108079722 958 CpG island CpG island 22320
Tssr91485 9 108079255 to 108079273 18 - TSS region transcription start site region 91485
Tssr91486 9 108079279 to 108079341 62 - TSS region transcription start site region 91486
Tssr91487 9 108079699 to 108079710 11 - TSS region transcription start site region 91487
Tssr91488 9 108079714 to 108079765 51 - TSS region transcription start site region 91488
Tssr91489 9 108080274 to 108080306 32 - TSS region transcription start site region 91489
Tssr87062 9 108080423 to 108080430 7 + TSS region transcription start site region 87062
Mst1 9 108080436 to 108085003 4567 + protein coding gene macrophage stimulating 1 (hepatocyte growth factor-like)
Tssr87063 9 108080446 to 108080462 16 + TSS region transcription start site region 87063
Tssr87064 9 108080467 to 108080478 11 + TSS region transcription start site region 87064
Mir7088 9 108081498 to 108081583 85 + miRNA gene microRNA 7088
Cpgi22321 9 108082017 to 108083097 1080 CpG island CpG island 22321
Tssr91490 9 108083330 to 108083370 40 - TSS region transcription start site region 91490
Apeh 9 108085413 to 108094490 9077 - protein coding gene acylpeptide hydrolase
Cpgi22322 9 108094080 to 108095248 1168 CpG island CpG island 22322
Tssr91491 9 108094459 to 108094487 28 - TSS region transcription start site region 91491
Tssr91492 9 108094527 to 108094542 15 - TSS region transcription start site region 91492
Tssr87065 9 108094657 to 108094696 39 + TSS region transcription start site region 87065
Tssr87066 9 108095192 to 108095213 21 + TSS region transcription start site region 87066
Tssr87067 9 108095237 to 108095251 14 + TSS region transcription start site region 87067
Bsn 9 108096022 to 108190384 94362 - protein coding gene bassoon