Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 9:107554900-107604912

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45 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Rassf1 9 107551555 to 107562267 10712 + protein coding gene Ras association (RalGDS/AF-6) domain family member 1
Cpgi22293 9 107553878 to 107555434 1556 CpG island CpG island 22293
Gm9917 9 107558809 to 107568415 9606 - antisense lncRNA gene predicted gene 9917
Cpgi22294 9 107562887 to 107563624 737 CpG island CpG island 22294
Tssr86994 9 107563246 to 107563285 39 + TSS region transcription start site region 86994
Tusc2 9 107563255 to 107566108 2853 + protein coding gene tumor suppressor 2, mitochondrial calcium regulator
Tssr86995 9 107563286 to 107563297 11 + TSS region transcription start site region 86995
Tssr91396 9 107566867 to 107566897 30 - TSS region transcription start site region 91396
Tssr91397 9 107566937 to 107566984 47 - TSS region transcription start site region 91397
Tssr86996 9 107567903 to 107567941 38 + TSS region transcription start site region 86996
Hyal2 9 107567945 to 107572779 4834 + protein coding gene hyaluronoglucosaminidase 2
Cpgi22295 9 107568975 to 107569705 730 CpG island CpG island 22295
Tssr86997 9 107569112 to 107569135 23 + TSS region transcription start site region 86997
Tssr86998 9 107569138 to 107569155 17 + TSS region transcription start site region 86998
Tssr86999 9 107569156 to 107569184 28 + TSS region transcription start site region 86999
Gm16343 9 107575820 to 107587425 11605 - antisense lncRNA gene predicted gene 16343
Tssr87000 9 107575906 to 107575917 11 + TSS region transcription start site region 87000
Tssr91398 9 107576817 to 107576840 23 - TSS region transcription start site region 91398
Tssr87001 9 107576915 to 107576976 61 + TSS region transcription start site region 87001
Hyal1 9 107576952 to 107580137 3185 + protein coding gene hyaluronoglucosaminidase 1
Tssr87002 9 107579900 to 107579912 12 + TSS region transcription start site region 87002
Naa80 9 107580170 to 107584048 3878 + protein coding gene N(alpha)-acetyltransferase 80, NatH catalytic subunit
Cpgi22296 9 107580607 to 107581088 481 CpG island CpG island 22296
Tssr87003 9 107580647 to 107580699 52 + TSS region transcription start site region 87003
Tssr87004 9 107580721 to 107580732 11 + TSS region transcription start site region 87004
Tssr87005 9 107580736 to 107580744 8 + TSS region transcription start site region 87005
Tssr87006 9 107580746 to 107580833 87 + TSS region transcription start site region 87006
Hyal3 9 107581296 to 107587359 6063 + protein coding gene hyaluronoglucosaminidase 3
Tssr87007 9 107581300 to 107581312 12 + TSS region transcription start site region 87007
Cpgi22297 9 107587418 to 107588288 870 CpG island CpG island 22297
Tssr87008 9 107587642 to 107587656 14 + TSS region transcription start site region 87008
Tssr87009 9 107587673 to 107587680 7 + TSS region transcription start site region 87009
Tssr87010 9 107587711 to 107587746 35 + TSS region transcription start site region 87010
Ifrd2 9 107587718 to 107593038 5320 + protein coding gene interferon-related developmental regulator 2
Tssr87011 9 107587757 to 107587801 44 + TSS region transcription start site region 87011
Tssr87012 9 107587866 to 107587889 23 + TSS region transcription start site region 87012
Tssr87013 9 107590924 to 107590945 21 + TSS region transcription start site region 87013
Tssr87014 9 107590946 to 107590976 30 + TSS region transcription start site region 87014
Lsmem2 9 107593841 to 107597075 3234 - protein coding gene leucine-rich single-pass membrane protein 2
Gm38150 9 107594440 to 107594891 451 + lincRNA gene predicted gene, 38150
Tssr91399 9 107594469 to 107594477 8 - TSS region transcription start site region 91399
Tssr91400 9 107597022 to 107597082 60 - TSS region transcription start site region 91400
Sema3b 9 107597674 to 107609229 11555 - protein coding gene sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3B
Cpgi22298 9 107598650 to 107599285 635 CpG island CpG island 22298
Cpgi22299 9 107599930 to 107600160 230 CpG island CpG island 22299