Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 9:107031141-107301233

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59 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Dock3 9 106892825 to 107231909 339084 - protein coding gene dedicator of cyto-kinesis 3
Gm17205 9 107047803 to 107049006 1203 + pseudogene predicted gene 17205
Gm22454 9 107096951 to 107097057 106 + snRNA gene predicted gene, 22454
Gm17117 9 107115074 to 107115372 298 + pseudogene predicted gene 17117
D9Dcr96 9 107153634 to 107153736 102 DNA segment DNA segment, Chr 9, Derry C. Roopenian 96
Gm23595 9 107164977 to 107165106 129 + snoRNA gene predicted gene, 23595
D9Dcr97 9 107166141 to 107166233 92 DNA segment DNA segment, Chr 9, Derry C. Roopenian 97
AA543401 9 107192807 to 107194061 1254 + pseudogene cDNA sequence, AA543401
Cpgi22279 9 107193430 to 107193961 531 CpG island CpG island 22279
Cpgi22280 9 107231115 to 107232458 1343 CpG island CpG island 22280
Gm22238 9 107231621 to 107231708 87 - miRNA gene predicted gene, 22238
Tssr91361 9 107231816 to 107231894 78 - TSS region transcription start site region 91361
Tssr91362 9 107231909 to 107231918 9 - TSS region transcription start site region 91362
1700039M15Rik 9 107241220 to 107243997 2777 + lincRNA gene RIKEN cDNA 1700039M15 gene
Tssr3007 9 107249786 to 107249789 3 - TSS region transcription start site region 3007
Mapkapk3 9 107254927 to 107289877 34950 - protein coding gene mitogen-activated protein kinase-activated protein kinase 3
Tssr91363 9 107261031 to 107261050 19 - TSS region transcription start site region 91363
Tssr86946 9 107278845 to 107278858 13 + TSS region transcription start site region 86946
Tssr91364 9 107280664 to 107280673 9 - TSS region transcription start site region 91364
Tssr91365 9 107280680 to 107280700 20 - TSS region transcription start site region 91365
Tssr91366 9 107280827 to 107280871 44 - TSS region transcription start site region 91366
Tssr86947 9 107288948 to 107288967 19 + TSS region transcription start site region 86947
Cpgi22281 9 107288982 to 107290005 1023 CpG island CpG island 22281
Tssr86948 9 107289025 to 107289037 12 + TSS region transcription start site region 86948
Tssr91367 9 107289391 to 107289422 31 - TSS region transcription start site region 91367
Tssr91368 9 107289469 to 107289480 11 - TSS region transcription start site region 91368
Tssr91369 9 107289502 to 107289517 15 - TSS region transcription start site region 91369
Tssr91370 9 107289706 to 107289786 80 - TSS region transcription start site region 91370
Tssr91371 9 107289806 to 107289818 12 - TSS region transcription start site region 91371
Tssr91372 9 107289834 to 107289845 11 - TSS region transcription start site region 91372
Tssr91373 9 107289847 to 107289866 19 - TSS region transcription start site region 91373
Tssr86949 9 107289960 to 107289978 18 + TSS region transcription start site region 86949
Gm17040 9 107292437 to 107293323 886 - pseudogene predicted gene 17040
Tssr91374 9 107295605 to 107295642 37 - TSS region transcription start site region 91374
Tssr91375 9 107295756 to 107295763 7 - TSS region transcription start site region 91375
Tssr86950 9 107295899 to 107295910 11 + TSS region transcription start site region 86950
Tssr86951 9 107295928 to 107295935 7 + TSS region transcription start site region 86951
Tssr86952 9 107296210 to 107296221 11 + TSS region transcription start site region 86952
Cpgi22282 9 107296221 to 107297353 1132 CpG island CpG island 22282
Tssr86953 9 107296223 to 107296235 12 + TSS region transcription start site region 86953
Tssr91376 9 107296471 to 107296507 36 - TSS region transcription start site region 91376
Cish 9 107296659 to 107302784 6125 + protein coding gene cytokine inducible SH2-containing protein
Tssr86954 9 107296682 to 107296737 55 + TSS region transcription start site region 86954
Tssr86955 9 107296843 to 107296900 57 + TSS region transcription start site region 86955
Tssr91377 9 107298215 to 107298227 12 - TSS region transcription start site region 91377
Tssr86956 9 107298356 to 107298371 15 + TSS region transcription start site region 86956
Tssr86957 9 107298628 to 107298636 8 + TSS region transcription start site region 86957
Tssr86958 9 107299152 to 107299156 4 + TSS region transcription start site region 86958
Tssr86959 9 107299351 to 107299365 14 + TSS region transcription start site region 86959
Tssr86960 9 107299411 to 107299425 14 + TSS region transcription start site region 86960
Tssr86961 9 107299912 to 107299921 9 + TSS region transcription start site region 86961
Tssr86962 9 107299945 to 107299955 10 + TSS region transcription start site region 86962
Tssr86963 9 107299971 to 107299982 11 + TSS region transcription start site region 86963
Tssr86964 9 107300000 to 107300019 19 + TSS region transcription start site region 86964
Tssr86965 9 107300020 to 107300031 11 + TSS region transcription start site region 86965
Tssr86966 9 107300040 to 107300047 7 + TSS region transcription start site region 86966
Tssr86967 9 107300093 to 107300104 11 + TSS region transcription start site region 86967
Gm17041 9 107300380 to 107301838 1458 - antisense lncRNA gene predicted gene 17041
Tssr91378 9 107300662 to 107300685 23 - TSS region transcription start site region 91378