Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 9:106887803-107209006

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26 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Manf 9 106887415 to 106891938 4523 - protein coding gene mesencephalic astrocyte-derived neurotrophic factor
Tssr86942 9 106890181 to 106890211 30 + TSS region transcription start site region 86942
Cpgi22278 9 106891364 to 106892724 1360 CpG island CpG island 22278
Tssr91353 9 106891366 to 106891373 7 - TSS region transcription start site region 91353
Tssr91354 9 106891380 to 106891391 11 - TSS region transcription start site region 91354
Tssr91355 9 106891394 to 106891397 3 - TSS region transcription start site region 91355
Tssr91356 9 106891401 to 106891438 37 - TSS region transcription start site region 91356
4930524O07Rik 9 106891547 to 106895182 3635 + antisense lncRNA gene RIKEN cDNA 4930524O07 gene
Tssr91357 9 106891908 to 106891920 12 - TSS region transcription start site region 91357
Tssr91358 9 106891931 to 106891947 16 - TSS region transcription start site region 91358
Tssr91359 9 106891965 to 106891970 5 - TSS region transcription start site region 91359
Tssr86943 9 106892114 to 106892123 9 + TSS region transcription start site region 86943
Tssr86944 9 106892450 to 106892475 25 + TSS region transcription start site region 86944
Tssr86945 9 106892476 to 106892487 11 + TSS region transcription start site region 86945
Dock3 9 106892825 to 107231909 339084 - protein coding gene dedicator of cyto-kinesis 3
Gm18542 9 106924970 to 106925887 917 + pseudogene predicted gene, 18542
D9Dcr95 9 106929925 to 106930020 95 DNA segment DNA segment, Chr 9, Derry C. Roopenian 95
Tssr91360 9 106979958 to 106979961 3 - TSS region transcription start site region 91360
Gm17205 9 107047803 to 107049006 1203 + pseudogene predicted gene 17205
Gm22454 9 107096951 to 107097057 106 + snRNA gene predicted gene, 22454
Gm17117 9 107115074 to 107115372 298 + pseudogene predicted gene 17117
D9Dcr96 9 107153634 to 107153736 102 DNA segment DNA segment, Chr 9, Derry C. Roopenian 96
Gm23595 9 107164977 to 107165106 129 + snoRNA gene predicted gene, 23595
D9Dcr97 9 107166141 to 107166233 92 DNA segment DNA segment, Chr 9, Derry C. Roopenian 97
AA543401 9 107192807 to 107194061 1254 + pseudogene cDNA sequence, AA543401
Cpgi22279 9 107193430 to 107193961 531 CpG island CpG island 22279