Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 9:106479683-106609688

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26 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Rrp9 9 106477259 to 106485422 8163 + protein coding gene RRP9, small subunit (SSU) processome component, homolog (yeast)
Cpgi22270 9 106481186 to 106481398 212 CpG island CpG island 22270
Tssr86922 9 106484481 to 106484493 12 + TSS region transcription start site region 86922
Tssr86923 9 106499936 to 106499939 3 + TSS region transcription start site region 86923
Tssr86924 9 106499954 to 106499965 11 + TSS region transcription start site region 86924
Tssr86925 9 106499967 to 106499972 5 + TSS region transcription start site region 86925
Iqcf1 9 106499967 to 106502250 2283 + protein coding gene IQ motif containing F1
Tssr86926 9 106499983 to 106499995 12 + TSS region transcription start site region 86926
Iqcf3 9 106504665 to 106561631 56966 - protein coding gene IQ motif containing F3
Tssr86927 9 106514572 to 106514602 30 + TSS region transcription start site region 86927
Iqcf5 9 106514573 to 106516003 1430 + protein coding gene IQ motif containing F5
Tssr86928 9 106514606 to 106514611 5 + TSS region transcription start site region 86928
Tssr91327 9 106544683 to 106544688 5 - TSS region transcription start site region 91327
Tssr91328 9 106550238 to 106550251 13 - TSS region transcription start site region 91328
Tssr91329 9 106550260 to 106550261 1 - TSS region transcription start site region 91329
D9Mit78 9 106553293 to 106553417 124 DNA segment DNA segment, Chr 9, Massachusetts Institute of Technology 78
D9Dcr90 9 106553313 to 106553408 95 DNA segment DNA segment, Chr 9, Derry C. Roopenian 90
Tssr91330 9 106561617 to 106561636 19 - TSS region transcription start site region 91330
Tssr3006 9 106561649 to 106561653 4 - TSS region transcription start site region 3006
Tssr86929 9 106561712 to 106561718 6 + TSS region transcription start site region 86929
Tssr86930 9 106561746 to 106561753 7 + TSS region transcription start site region 86930
Iqcf4 9 106568319 to 106570967 2648 - protein coding gene IQ motif containing F4
Tssr91331 9 106570983 to 106571005 22 - TSS region transcription start site region 91331
Gm39420 9 106577639 to 106626384 48745 - lncRNA gene predicted gene, 39420
Gm39421 9 106580271 to 106583783 3512 + lncRNA gene predicted gene, 39421
D9Dcr91 9 106603645 to 106603743 98 DNA segment DNA segment, Chr 9, Derry C. Roopenian 91